Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1167 |
Symbol | |
ID | 5752894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1381343 |
End bp | 1381855 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641287437 |
Product | type IV pilus biogenesis protein, putative |
Protein accession | YP_001553603 |
Protein GI | 160874287 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4970] Tfp pilus assembly protein FimT |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.350797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTC ATCAAAAAGG CTTTAGCCTG ATAGAACTTA TGACTACGCT ATCGATTTCA ACCATCTTGT TTACTGTGGG TACGCCATCC TTTACGGATC TCAGCGATCA AATAAGAGCG GATTCCAATA TCAGGACTAT CCAACAAACA CTCATGCTGG CTCGAAATAC GGCGATTAAT TATGGATATA GAGTTACTGT TTGCCCACTC GTGGATGGAA AATGTACTCA AAATTGGCAA AAAGGATTAA CTGTATTCAT TGATTCTGAT ACGGTAGAAA CCTTAGATGT TAACGATAAA GTCATTCGTA TTATTGATGA ATTTGATACA AAAGACTTTT TAAAATACAA CAAAAGCTCG ATAAAATTTC AACCAGATGG ATTAGCTTCA GGAAGTAATG GGACTTTCAA ATACTGTCCA CGGACCGTAG ATAGCAAAAA CTCCCGTGCA ATTGTTGTTA ATCAGGCTGG TCGGATTCGG TTTTCTACGG CTAAAAATAT CAGTTGCGAT TAA
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Protein sequence | MNTHQKGFSL IELMTTLSIS TILFTVGTPS FTDLSDQIRA DSNIRTIQQT LMLARNTAIN YGYRVTVCPL VDGKCTQNWQ KGLTVFIDSD TVETLDVNDK VIRIIDEFDT KDFLKYNKSS IKFQPDGLAS GSNGTFKYCP RTVDSKNSRA IVVNQAGRIR FSTAKNISCD
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