Gene Sbal195_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1167 
Symbol 
ID5752894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1381343 
End bp1381855 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content38% 
IMG OID641287437 
Producttype IV pilus biogenesis protein, putative 
Protein accessionYP_001553603 
Protein GI160874287 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4970] Tfp pilus assembly protein FimT 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.350797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTC ATCAAAAAGG CTTTAGCCTG ATAGAACTTA TGACTACGCT ATCGATTTCA 
ACCATCTTGT TTACTGTGGG TACGCCATCC TTTACGGATC TCAGCGATCA AATAAGAGCG
GATTCCAATA TCAGGACTAT CCAACAAACA CTCATGCTGG CTCGAAATAC GGCGATTAAT
TATGGATATA GAGTTACTGT TTGCCCACTC GTGGATGGAA AATGTACTCA AAATTGGCAA
AAAGGATTAA CTGTATTCAT TGATTCTGAT ACGGTAGAAA CCTTAGATGT TAACGATAAA
GTCATTCGTA TTATTGATGA ATTTGATACA AAAGACTTTT TAAAATACAA CAAAAGCTCG
ATAAAATTTC AACCAGATGG ATTAGCTTCA GGAAGTAATG GGACTTTCAA ATACTGTCCA
CGGACCGTAG ATAGCAAAAA CTCCCGTGCA ATTGTTGTTA ATCAGGCTGG TCGGATTCGG
TTTTCTACGG CTAAAAATAT CAGTTGCGAT TAA
 
Protein sequence
MNTHQKGFSL IELMTTLSIS TILFTVGTPS FTDLSDQIRA DSNIRTIQQT LMLARNTAIN 
YGYRVTVCPL VDGKCTQNWQ KGLTVFIDSD TVETLDVNDK VIRIIDEFDT KDFLKYNKSS
IKFQPDGLAS GSNGTFKYCP RTVDSKNSRA IVVNQAGRIR FSTAKNISCD