| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1159 |
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| Symbol | ispH |
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| ID | 5752886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 1373207 |
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| End bp | 1374163 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641287429 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001553595 |
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| Protein GI | 160874279 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.603197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG ATCCTACCAG CCCAAGTTTG AATATTATGC TCGCGAACCC GCGTGGTTTT
TGTGCGGGGG TTGATCGTGC TATCAGTATT GTTGAACGGG CGTTGGAATT GTTTTCACCG
CCTATCTATG TTCGACATGA AGTCGTACAT AATCGCTATG TCGTGCAGAA TTTGAAGGAT
CGCGGTGCGG TTTTTGTCGA AGAGTTAGAT CAAGTGCCGG ATAACAACAT TGTTATCTTC
AGTGCCCATG GTGTATCTCA AGCGGTGAGA CAAGAAGCTA AGGCTCGAGG GTTGAGAGTT
TTCGATGCGA CTTGTCCCTT AGTGACCAAA GTGCACCTTC AAGTGACGCG TGCAAGCCGT
AAAGGTATTG AATGTATCTT GATTGGCCAC GAGGGGCACC CTGAAGTCGA AGGCACTATG
GGTCAGTATG ATAATCCTAA CGGCGGCGTT TATCTGATTG AATCGCCTGC CGATGTAGAT
GCTCTCGAAG TTCGCGATCC TAACAATCTC TGCTTCGTGA CCCAAACAAC TTTATCTGTC
GATGATACGT TAGACATTAT TGCCGCGTTG CAAAAAAGGT TTCCTTCAAT TGAAGGACCT
CGTAAAGACG ATATCTGTTA TGCAACACAG AATCGTCAAG ATGCGGTACG TAATCTGTCT
GCAGATGTGG ATTTGTTGAT TGTTGTTGGT TCAAAAAACA GCTCTAACTC TAATCGGTTA
CGCGAGCTCG CATTGAAGAC CGGAACCCAG TCTTATCTGG TGGATACTGC TGACGATGTT
GAATCAAGCT GGTTCGATAA TGTTTCGCGT GTTGCTGTTA CCGCAGGCGC TTCTGCACCT
GAGGTCTTAG TTCAACAAGT TGTCCAAGCG ATTGCGAAAC TCGCTCCTAG TGTGGTGACT
GAAGTCGAAG GACGTAAGGA AGACACTGTC TTTGCGGTGC CTGCCGAACT GCGTTAA
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| Protein sequence | MKLDPTSPSL NIMLANPRGF CAGVDRAISI VERALELFSP PIYVRHEVVH NRYVVQNLKD
RGAVFVEELD QVPDNNIVIF SAHGVSQAVR QEAKARGLRV FDATCPLVTK VHLQVTRASR
KGIECILIGH EGHPEVEGTM GQYDNPNGGV YLIESPADVD ALEVRDPNNL CFVTQTTLSV
DDTLDIIAAL QKRFPSIEGP RKDDICYATQ NRQDAVRNLS ADVDLLIVVG SKNSSNSNRL
RELALKTGTQ SYLVDTADDV ESSWFDNVSR VAVTAGASAP EVLVQQVVQA IAKLAPSVVT
EVEGRKEDTV FAVPAELR
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