Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1140 |
Symbol | |
ID | 5752867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1352144 |
End bp | 1352749 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641287410 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001553576 |
Protein GI | 160874260 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.556495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCATTAG CAATACCGCA ATTACCAACC CATGAGCACT CAGATGAGCA ATTGATGTTG TGCTATGCCA AGGGCGATTC AAAAGCATTT GAGCAGTTAT ACCTGAAGCA CAAAGGCGCG CTTTATCGCT ACTTTGTGCG CCAGTTAGGT GATAAGCAGT TAGCTGAGGA TTTATATCAA GAAACTTGGG GACGGGTGAT CCGCGTAGCG GCTAACTACG AGGCCAGTGC TAAGTTTACT ACTTGGCTAT ATCGTATCGC CCATAACTTA TTGATTGATC ATGTGCGAGC GGTTAAGCCC GTCGATTTAG TCGCCACTGA TGAGGACGAA ACTGGGCTCG ATACTTTTGT GGCGGGTGAG CAAGATAAGC CCGACGTGCA GTGGCAAGAA GCGCAAAAGA GTTTATTGCT AAAGACCTGT ATCGCACTGT TACCCCAAGT CCAGAAAGAG GCATTTATCC TGAACATTGA AATGGGTTTT ACGGCTGCCA TCATTAGCGA CATTGCGGGC GTGACTTTAG AAGCGACTAA GAGCCGTATT CGCTACGCTT ACCAAAGTCT AAAGGATTGC GTTAGCGCGA AATGGCAGGA GGCGGGTCAT GAGTAA
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Protein sequence | MALAIPQLPT HEHSDEQLML CYAKGDSKAF EQLYLKHKGA LYRYFVRQLG DKQLAEDLYQ ETWGRVIRVA ANYEASAKFT TWLYRIAHNL LIDHVRAVKP VDLVATDEDE TGLDTFVAGE QDKPDVQWQE AQKSLLLKTC IALLPQVQKE AFILNIEMGF TAAIISDIAG VTLEATKSRI RYAYQSLKDC VSAKWQEAGH E
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