Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1135 |
Symbol | |
ID | 5752862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1344939 |
End bp | 1346192 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641287405 |
Product | diguanylate cyclase |
Protein accession | YP_001553571 |
Protein GI | 160874255 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATTAA GGGATAATTT CAAACGTAAG ACCATAGATC GCTTAGATTA TCGCTATCAT CTGCTATTGC TCATCGTGCC GATATGTCTA TTCGTCCTGC TATTTATCTT TAATGCACCC ACAGAAGGTT GGACTATCCT GCCATTACTG TTTGTTTGCA TCATTTACAT TTTTGCCTAC AGCCTGATTT ACTATTTGCA TCAAGGTCGT TTAACTCGAC TGTGGGAGCA TTTAGAGCAA GTCGTCACCA TCAATGATGC CATTTACGAG CTCGCGCACC TATCAAGCCA TTATAAAAAT GAGCATGCTT TTCTCGACGC CTTACTCAAC AAAGCCGTGT ACGTGATTAA TGGTGCCGAA ATGGGCAGCA TCATAAAAGT CAACGAGGCC AATAACAAAC TGCATTTCGA ATCTGTCGTG GGGCTCGATT TAGCAAAACT CAGACAACTG GATTTTACCT TAGAGCAAAC CTTTGAATAT CGGCTCACTA AGGGGAGATG CGATCAGGTC GTGGTCATCA ATGATATGAA AAATATCAAT GCAGCCAGCA CCTTAACGGA AGATGATCAA AGAGTGTTAC TCACAGTGTC GAAGCAGCCG ATACGCTCAA CACTGTCTAG CCCTATCCGT ATCGATGGCA AGCTCTATGG CATGCTCAAC CTCGACAGCA GTAGCCTTGG TGCCTTTAGC GATTACGACC GCAACCTTGT CTCTATCCTG ACCCACGAAG CCAGTAATGC TATTGCGCTC TATCAGAAGT CACAGCAGAT CACTAAACTT GCGAATTTCG ATCCACTCAC AGGGCTTTAT AATCGAAAGA ATTTTGAAGA TGAACTACAC CACTGGCAGC ACAAACCTCA CCTTGGCAGC TTTTTGATTA TTATAGATAT GGATAATCTC AAGGCCATTA ATGATGCCTA TGGACACCAG ACAGGCGATG TTGCCATTAA GCGCACAGCC ACAGCCATAC TGACCTATTG GCAAAATAAG GGCATTATTT CCCGTTTTGG TGGCGATGAG TTTGTCGCTT TATGCCATGG GCCGCTAACC CAAATCGAGG AGGACTTAGA TAATATGCGC AAAACGTTAA ATCAAGGTTC AGAGCTTAGC CTCGCTTTTA GCTTTGGGAT TGCACCCTTC GAAACCGATT GGTATCAATC CTTTAAGACT GCAGATCATG CCATGTATGA GCAAAAGCGC GCGAAGAAGA AAGCCATTAA AGCATTAGAA ACTTTCGCGG TGAAAGCACA ATAA
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Protein sequence | MKLRDNFKRK TIDRLDYRYH LLLLIVPICL FVLLFIFNAP TEGWTILPLL FVCIIYIFAY SLIYYLHQGR LTRLWEHLEQ VVTINDAIYE LAHLSSHYKN EHAFLDALLN KAVYVINGAE MGSIIKVNEA NNKLHFESVV GLDLAKLRQL DFTLEQTFEY RLTKGRCDQV VVINDMKNIN AASTLTEDDQ RVLLTVSKQP IRSTLSSPIR IDGKLYGMLN LDSSSLGAFS DYDRNLVSIL THEASNAIAL YQKSQQITKL ANFDPLTGLY NRKNFEDELH HWQHKPHLGS FLIIIDMDNL KAINDAYGHQ TGDVAIKRTA TAILTYWQNK GIISRFGGDE FVALCHGPLT QIEEDLDNMR KTLNQGSELS LAFSFGIAPF ETDWYQSFKT ADHAMYEQKR AKKKAIKALE TFAVKAQ
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