| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1115 |
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| Symbol | |
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| ID | 5752836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 1313768 |
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| End bp | 1314538 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641287379 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001553551 |
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| Protein GI | 160874235 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.288715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0098701 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCGAA CTTGCATCCT GCTAGAATGG CTATCTCATT CATATTTCGT CATTTGTGGT
GTTATGCAAT CTAAGCGCGG CCGACTCGAT CGTTATCTTT GTACCCAGTT ACACACTCAC
CGTAAAGCGG TGCGTGAACT GCTATTATCG GGCCGAGTGT GCGTCGATGG ATTGATAGTG
AAAGATATGG ATAGGCAAGT GGATGAGTTT TCCCACATCC AACTCGATGA GCAAATACTG
CAGGCTAATG TGCCCGTCTA TGTGATGCTC CACAAGCCGA TTGGAGTGGT GAGTGCTACC
AAAGATACTC AGCATAAAAC TGTGATTGAT TTGCTTGATT GCGAAGCCCG TGATGAGTTG
CATATCGCCG GCAGATTAGA TTTAAACTCT TCGGGTTTGT TGTTATTGAC CAATGACAGC
CGCTGGTCTG ATGCGCTGAT GTCACCTACA CACAAGGTCG ATAAAGTGTA TCGAGTTACC
TTGGCTAATC CCATAACCGA AGAATACATC GCTGCATTTG CCGCAGGGAT GTACTTTGGC
TTTGAAGATA TTACGACTCA ACCGGCTAAA TTGGTTATCC TTGCTGATAA CGTGGCTGAA
GTGACGTTAC ATGAAGGTAA GTATCATCAA ATCAAGCGGA TGTTTGGTCG ATTCCGCAAT
CCGGTTGTTG GCCTGCATCG ATTGTCGATA GGCGATATTG TGCTCGATGA AAAACTCGCT
CCGGGTGAAA GTCGCGCACT CACTGCTGCT GAAGTGGCCT CTATCCGTTA A
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| Protein sequence | MSRTCILLEW LSHSYFVICG VMQSKRGRLD RYLCTQLHTH RKAVRELLLS GRVCVDGLIV
KDMDRQVDEF SHIQLDEQIL QANVPVYVML HKPIGVVSAT KDTQHKTVID LLDCEARDEL
HIAGRLDLNS SGLLLLTNDS RWSDALMSPT HKVDKVYRVT LANPITEEYI AAFAAGMYFG
FEDITTQPAK LVILADNVAE VTLHEGKYHQ IKRMFGRFRN PVVGLHRLSI GDIVLDEKLA
PGESRALTAA EVASIR
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