Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1100 |
Symbol | cysM |
ID | 5752821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1302127 |
End bp | 1303005 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641287364 |
Product | cysteine synthase B |
Protein accession | YP_001553536 |
Protein GI | 160874220 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | [TIGR01136] cysteine synthases [TIGR01138] cysteine synthase B |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00123647 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0556364 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTGACT TTCCGACAAT TGAAGCCTGT ATTGGGCAAA CTCCGCTGGT TCGCTTACAG CGGCTTAACT GTGGCACCTC AACTGTACTG TTAAAGTTGG AAGGGAATAA CCCAGCGGGT TCAGTGAAAG ATCGTGCAGC ACTCAATATG ATCATTCAGG CCGAACTGCG TCAAGAGATC CGCCCGGGTG ATACGCTTAT CGAGGCGACG AGTGGCAATA CTGGGATTGC GTTAGCGATG GCGGCGGCGA TCAAAGGATA CAAGATGATC CTGATTATGC CCGAAAACTC GACCCAAGAG CGTAAGGATG CGATGCAAGC TTATGGCGCA GAACTCATGC TGGTGGATAA CATGGAAACG GCGCGGGATT TGGCACTGCA GTTACAAACC GAAGGCAAAG GTAAGGTGCT GGATCAGTTT AATAATCAAG ATAATGCGAA TGCGCATTTC CTCACCACAG GTCCGGAAAT CTGGCAACAG AGTCAAGGTA AGATCACTCA CTTTGTCTCT AGTATGGGGA CGACAGGCAC TATAATGGGC GTGTCTAAAT ACCTTAAAAG CTGTAATCCC GACATCACGA TTGTCGGCCT TCAGCCCGCC GATGGCAGTA GCATTCCGGG GATCCGCCGC TGGCCGCAGG CGTACTTGCC GGGGATTTTC GATGCATCCC GTGTAGATTT AGTCATGGAT GTTGAAGAGC AAGATGCAAA AGCCATGGCG AGAGCCTTAG CGCGCGAAGA AGGGATTTGT GCTGGCGTCA GCTCTGGTGG TGCTGTGTTT GCTGCGCTTG AGATAGCCAG ACTGAATCCA GATTCAGTGG TTGTGGCGAT TGTTTGTGAT AGGGGCGATC GTTACCTTTC ATCAGGGCTT TTTTCCTGA
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Protein sequence | MSDFPTIEAC IGQTPLVRLQ RLNCGTSTVL LKLEGNNPAG SVKDRAALNM IIQAELRQEI RPGDTLIEAT SGNTGIALAM AAAIKGYKMI LIMPENSTQE RKDAMQAYGA ELMLVDNMET ARDLALQLQT EGKGKVLDQF NNQDNANAHF LTTGPEIWQQ SQGKITHFVS SMGTTGTIMG VSKYLKSCNP DITIVGLQPA DGSSIPGIRR WPQAYLPGIF DASRVDLVMD VEEQDAKAMA RALAREEGIC AGVSSGGAVF AALEIARLNP DSVVVAIVCD RGDRYLSSGL FS
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