Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1094 |
Symbol | |
ID | 5752815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1294973 |
End bp | 1296118 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641287358 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001553530 |
Protein GI | 160874214 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.656518 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTAT TGCTGATATT GACCTACGCC GCTATCTGTA TTGTTATTTT TAAAGTCTTT AAAATCCCTC TGACCAAATG GACGGTTCCT ACTGCCGTTT TGGGGGGCGT GGTGCTCATC GGTGCCTTGA TACTGCTAAT GAACTATAAC CATCCCTATT CACGTTTTGC TCGGGAATAT TTTGTCACCA TTCCGATTAC ACCCGCAGTA AAAGGGTTAG TTAGTCGTGT TGAAGTGCAG CCAAATACTC CGGTTAAACA AGGGGATGTA CTTTTTCGGA TTGATCCCAT CCCCTTTGAG GCCGTAGTAA AGCGTAAGCG TGCCGCGTTA GTCGCTGCCG AGTTAGAAGT GCCACAGCTC GCCGCCGCAT TGGAATCGGC TAAAGCTAAT GTTGAGCGAG TCAATGCTGA TAAAGATCGC AATAAATCCG CCTATGAACG CTATGAAAGC GGTCATCGAA AAGGAGGCGC TAACTCTCCC TTTACCGCAT TAGAATTGGA TAATAAACGC CAACTGTATC TTGCCTCTGA AGCGCAGTTA ACTGCCGCTA GATCAGAAGA GTTACGGATG AGGCTCGCCT ATGAGTCTAA TATTGATGGA GTTAATACCA AAGTGGCTGG CTTACAGGGA GATTTAGCGA GCGCACTCTA TGATTTAGAG CAGACCGTCG TGCGAGCACC CGCTGACGGT ATCGTCACAC AAATGGCACT CCGTCCGGGG GCTATGGCTG TGCCTTTACC ATTACGTCCC GTGATGAGCT TTATCCCTGA CGAGCAACGT TATTTTGCCG GAGCCTTTTG GCAGAATTCC CTACTGCGCC TGAAAGAAGG CGATGAGGCC GAGATTATTC TCGATGCCGC GCCAGGGAAA GTGTTTAAAG GCAAAGTGGC GAAAGTGCTA CCCGCAATGG CTGAAGGTGA GATCCAAATG GGTGGCGTAT TAGCGTCCTC CAGTCGTCTG TTTCAAAATG GTCGAGTGGT TGTTCTTATC GATATAGATG ACGATGCTAT TCGTAAAGAG TTCCCTGCTG GAGTGTCAGG TCAAGTTGCT ATTTACACTG AGCACTTTCA TCATGTAGCT GTAATGCGTA AGGTATTACT CAGGATGCAA GGGTGGTTGA ATTACTTATT TTTTGATGGA CATTAG
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Protein sequence | MDLLLILTYA AICIVIFKVF KIPLTKWTVP TAVLGGVVLI GALILLMNYN HPYSRFAREY FVTIPITPAV KGLVSRVEVQ PNTPVKQGDV LFRIDPIPFE AVVKRKRAAL VAAELEVPQL AAALESAKAN VERVNADKDR NKSAYERYES GHRKGGANSP FTALELDNKR QLYLASEAQL TAARSEELRM RLAYESNIDG VNTKVAGLQG DLASALYDLE QTVVRAPADG IVTQMALRPG AMAVPLPLRP VMSFIPDEQR YFAGAFWQNS LLRLKEGDEA EIILDAAPGK VFKGKVAKVL PAMAEGEIQM GGVLASSSRL FQNGRVVVLI DIDDDAIRKE FPAGVSGQVA IYTEHFHHVA VMRKVLLRMQ GWLNYLFFDG H
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