Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1080 |
Symbol | pdxA |
ID | 5752801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1277435 |
End bp | 1278421 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641287344 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_001553516 |
Protein GI | 160874200 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0781373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCACTA AACGTATTGC CATTACCCCA GGTGAACCCG CAGGTATTGG CCCCGATTTA GTCGTACAAC TCGCTCAGCA GGCTTGGCCT GCTGAGTTAG TCGTTTGTGC GGATCCAGAA TTATTAAGCA GCCGTGCTAA ACGACTCGGT TTGCAAGTGA CTTTCCGTCC TTACCAGCCA AATCAAGCGC CTAAACCGCA AGAAGCGGGC ACATTAACCA TTGCCCCCTT CAAGCTAGTG ACCGAATCGA TTTGCGGTCA GCTCGATGAA CAAAACAGCA CTTATGTGGT TGAAACCTTG CGTTATGCGG GCGAGAAAAA CATGAGCGGC GAGTTTGATG CCGTCGTGAC AGGTCCGGTA CACAAAGGCA TTATCAATCA AGCGGGTATT TCCTTTAGTG GCCATACTGA GTTTTTTGCC CATCAAGCAA ATTGCCCAGA TGTGGTGATG ATGCTGGCAA CGCCGGGATT ACAAGTGGCA CTCGTGACCA CACATATCCC GCTGGCCTAT GTTGCAAAAG CGATAACACG TCAACGCCTA CAGCATATTA TCAAGATTTT ACATGCCGAT CTCATCAGCA AATTTGGCAT AGTTTCACCG AAGATTTATG TCTGTGGCCT CAATCCACAC GCAGGTGAAG ACGGCCATTT AGGGCGTGAA GAAATCGACG TGATTATTCC TGCACTCAAC GAGTTGCGAG AAGAGTTCCA GATGAATATT GTCGGCCCAT TACCGGCCGA TACCCTGTTC CAACCTAAAT ATTTACAGGA CGCCGATGTC GTCTTGGCCA TGTACCATGA CCAAGGACTT CCCGTTCTCA AGTCACAAGG ATTTGGCAAA TCGGTAAACA TCACCTTAGG TTTACCTTAT ATTCGTACCT CGGTTGACCA TGGTACGGCG CTCGATCTCG CGGGTACAGG CAAAGCCGAT ATTGGCAGCT TTGTGTGTGC TCTGAATAAA GCCATTGAGT TATCCTCAAA GAACTAA
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Protein sequence | MSTKRIAITP GEPAGIGPDL VVQLAQQAWP AELVVCADPE LLSSRAKRLG LQVTFRPYQP NQAPKPQEAG TLTIAPFKLV TESICGQLDE QNSTYVVETL RYAGEKNMSG EFDAVVTGPV HKGIINQAGI SFSGHTEFFA HQANCPDVVM MLATPGLQVA LVTTHIPLAY VAKAITRQRL QHIIKILHAD LISKFGIVSP KIYVCGLNPH AGEDGHLGRE EIDVIIPALN ELREEFQMNI VGPLPADTLF QPKYLQDADV VLAMYHDQGL PVLKSQGFGK SVNITLGLPY IRTSVDHGTA LDLAGTGKAD IGSFVCALNK AIELSSKN
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