Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1053 |
Symbol | |
ID | 5752774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1247180 |
End bp | 1248049 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641287317 |
Product | TonB family protein |
Protein accession | YP_001553489 |
Protein GI | 160874173 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0250994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACACCAA AACGATATCT TGCCTTTGGC GCGTTAACTG TTGCCATACA AACGGGGGTT ATCGCCTCGC AACCCGCTAT CACTATGCAG CAAAGCGCCC AAGCATCGAG TGTAAACCAA GTGGCGAACG CTCCGAGCGC AAATCGTGTC ACCCTTAATT TGGCTACAAC AACAAGCTCT GCAAGCAGCA ACGTCAGTAT TGAGCCCACT CAAACAGACG CCAAAATAGC CACTGTAAAC AGCACAGTGC GAAAAGTATC AACAGCAGAA TCTGTCGATA AGACGGTTAG AGAGGCCGTT GAAAAAACCA AAGCTGATCA AAGAATTGAC AGCCAGTTAG CTAAGACATC TTCAACCGCA AAGCCTACGA CTAAAAATCA TCCAGATGCG GATCCTTTAT CGATGAACGC TTTAGTAAAT AAGCGACCCG AACATGTTGA ACAAGAATTA GAGCTAAAAA CAGAGCCCAA AACAGCACAA GAACTAACGA ATTTAATCGC TAACGCAGCC GAACTAGATG CAAAAGCTAC CCAGAATGTG GCCAGTGCAG CATCTGACAA TGCCCCATTT AACGACAGCC TCCAAACGAA CATAGTGGAA TTAGCCAAAC CGCTGTTTGC TACAGCGCCA CCGCAACCGA CTTATCCGCG AATAGCACGT AAGAAAGGAT TCGAAGGAAC GGCAACCATA GAAGTGATGT TTAACGAACT TGGCGAGCAA CTGGTACTGA CGTTAGTTAC AAGCTCAGGC TTCAGCCTGC TAGATCAAGC AGCAATCGCT GCGGTTGAAA ACTGGCAATT TGCGGCGCCG ACGCCAAGGC TAGCGAGTCA CTACAAGGTC AGAGTGCCTA TTCGTTTCGC GCTCAACTAG
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Protein sequence | MTPKRYLAFG ALTVAIQTGV IASQPAITMQ QSAQASSVNQ VANAPSANRV TLNLATTTSS ASSNVSIEPT QTDAKIATVN STVRKVSTAE SVDKTVREAV EKTKADQRID SQLAKTSSTA KPTTKNHPDA DPLSMNALVN KRPEHVEQEL ELKTEPKTAQ ELTNLIANAA ELDAKATQNV ASAASDNAPF NDSLQTNIVE LAKPLFATAP PQPTYPRIAR KKGFEGTATI EVMFNELGEQ LVLTLVTSSG FSLLDQAAIA AVENWQFAAP TPRLASHYKV RVPIRFALN
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