Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1049 |
Symbol | |
ID | 5752770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1243416 |
End bp | 1244432 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641287313 |
Product | transport system permease protein |
Protein accession | YP_001553485 |
Protein GI | 160874169 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.542405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCCTCA ATCGCTGGCT CTGGCCCGGT TTAGTCACAC TGTTAGCCCT AAGCTGCTTA CTCTCGGTCA GTACTGGGCC AGTCAGTATC AGCCTAGTGG ATGCCCTAAG CGCAGTGCTT AATTGGGCGA CCCAGCAAAA CATCGGCAAT ATTGCACCCC ACGAGCAACT GGTGATCAAC AATGTTCGCC TGCCGCGGAC ATTATTGGCA CTGGCGGTGG GCGCCACGCT CGCTCAATGC GGCGCAGTGA TGCAGGGACT GTTTCGTAAT CCATTGGCGG ATCCCGGTAT TATCGGGGTG TCATCTGGCG CAGCTCTTGG CGCGGCCATC TGTATCGTGC TGTTACCCAA TGCAAATCCA TTCATGATCC CCATCAGTGC CTTTGTATCG GGTTTAATCA CCACCCTTGT TGTCTATCGC CTCGCCAGTA GCCCAACCGG AACATCGGTC GTGTTATTAC TACTGTCGGG GGTCGCTATT GCAGCACTGG CAGGCGCAGG AATTGGCATG CTCACGTACC TTGCCAACGA CATGGCGCTA CGTGACTTAA CCTTGTGGCA GATGGGCTCG ATAGCAGGTG CGCAGTGGAT GTATGTCAGC CTGTGTCTCG TGACTTTAGC ATTACTAAGC TGGCTATTTC GCCAAGATGC GGCGGCGCTC AATGCCTTAT TGCTTGGCGA ATCCGAAGCG CGCCACTTAG GGATAGATGT CGATAGGCTC AAGCTTAGAC TTATTTTACT TTGCGCCTTA GGCGTTGGCG TAAGCGTCGC GGCGACCGGC ATTATTGGCT TTATCGGCCT AGTGGTACCG CATTTAGTGC GGATGATGTT AGGGCCAGAT CATCGCCAAC TGCTGCCCAT CAGCGCCCTT TTAGGTGCAG CCCTATTAGC CTTAGCCGAT ATCGGCGCTC GCGCCTTCTT GCCACCAGCA GAGTTACCGG TTGGGTTAGT GACCGCGCTC ATAGGTGCGC CATTCTTCAT CTTCTTACTA CTGCAACAAC GCAGTAAGCT CATCTAA
|
Protein sequence | MFLNRWLWPG LVTLLALSCL LSVSTGPVSI SLVDALSAVL NWATQQNIGN IAPHEQLVIN NVRLPRTLLA LAVGATLAQC GAVMQGLFRN PLADPGIIGV SSGAALGAAI CIVLLPNANP FMIPISAFVS GLITTLVVYR LASSPTGTSV VLLLLSGVAI AALAGAGIGM LTYLANDMAL RDLTLWQMGS IAGAQWMYVS LCLVTLALLS WLFRQDAAAL NALLLGESEA RHLGIDVDRL KLRLILLCAL GVGVSVAATG IIGFIGLVVP HLVRMMLGPD HRQLLPISAL LGAALLALAD IGARAFLPPA ELPVGLVTAL IGAPFFIFLL LQQRSKLI
|
| |