Gene Sbal195_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1033 
Symbol 
ID5752754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1229248 
End bp1230447 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content47% 
IMG OID641287297 
Producthypothetical protein 
Protein accessionYP_001553469 
Protein GI160874153 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACATA TTAAACCTAT TCTCAGCAGT TTGTTGCGCA GTAAAAGCGG TCCTGTCTTA 
CTGCTTATTC AGATTATTTT GTCTGTGGCA ATTGTGGCGA ACGCGAGCTT TATTATTCAG
GAGCGTTTAG CCCTGATGCA GCGCGTTTCG GGAGTCGAAG AGTCTGAAGT CTTGACCTTT
AGCTTGTTCA ACTTCGATCC ATTGATCGAT AAAACCGCGC AAAACAAAAT TGATCAGCAA
ATTTTACGTG GGCTACCCAA TGTGATTGAT GCGACCTCAA CCAATATGTT GCCATTAAGC
GGTGGTGGCT GGTCGAGCAC CTTCAATTTG GGGCCCGATC CGGATAGCGC TAAATCGACA
CCGCAATTTG CCATGTACTT AGGGACAGAT CACACCCTTG AGACCTTAGG CCTTAAGCTG
ATTGAAGGGC GTAACTTTTA TCCCCATGAA CTTAAGGACA ATCTCGATAG CCCGAGCCGA
TTAGCGATCA TCTCCAGCGC GTTAGCTAAA GCGATTTGGC CTGATGAATC ACCACTTGGC
AAAGTGTTGT ACGAGGGTAA AGATGCACAG ATCACTGTGA TAGGGGTTGT CGATAAACTG
CAAGGCGCGT GGATTGACAG TTCTAGCCTT GAAAACAGTG TGATTCAAAA TGTGGATTAT
GGCAGCAGTT CTTACATGGT ACGGGCCAAA CCTGAGTTTC ACGCCGAGCT TAAAGATGCG
ATAAAAAAAG CGTTGCTGGC CGAGAATCCT AACCGAGTTC TCGATGGCTT TAAGTCAATC
GAGGCGTTAA AAGATAGCTC ATACCGCGAT CATAAATTGA TGATTACCGT GTTGATCATG
ATGGTAGTGT TGCTGCTGCT GATCACCTCG CTCGGTTTAA CCGGTATGGT GATGTTTAAT
ATCCAGCGCC GCACTAAGCA GATAGGTACC CGCCGTGCAC TGGGTGCGAA AAAGCGCGAC
ATTGTCAGTT ACTTCCTCGT AGAAAATTAT TTGATTTGCT TAGCGGGAGG CGTGCTGGGT
GGCTTGTTAG CGATACAGTT AGGGCAGCAG TTAATGAAAA TCTATAGCTT GCCTATGTTG
GACTTAAGTT ATCCATTATT TACTGTGGCA GGCTTGTTTA TTGTCACCAC GCTAGCGGTT
TACCTACCAG CGCGTAAGGC GGCAAATATT TCGCCAGCAA CGGCAACCCG CAGCGTATAG
 
Protein sequence
MLHIKPILSS LLRSKSGPVL LLIQIILSVA IVANASFIIQ ERLALMQRVS GVEESEVLTF 
SLFNFDPLID KTAQNKIDQQ ILRGLPNVID ATSTNMLPLS GGGWSSTFNL GPDPDSAKST
PQFAMYLGTD HTLETLGLKL IEGRNFYPHE LKDNLDSPSR LAIISSALAK AIWPDESPLG
KVLYEGKDAQ ITVIGVVDKL QGAWIDSSSL ENSVIQNVDY GSSSYMVRAK PEFHAELKDA
IKKALLAENP NRVLDGFKSI EALKDSSYRD HKLMITVLIM MVVLLLLITS LGLTGMVMFN
IQRRTKQIGT RRALGAKKRD IVSYFLVENY LICLAGGVLG GLLAIQLGQQ LMKIYSLPML
DLSYPLFTVA GLFIVTTLAV YLPARKAANI SPATATRSV