Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1031 |
Symbol | |
ID | 5752752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1227175 |
End bp | 1227915 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641287295 |
Product | ABC transporter related |
Protein accession | YP_001553467 |
Protein GI | 160874151 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATCAA TGAAGAGTGT GAGCAAGGTT TTTAAAACGG ATTTAGTGGA AACCCACGCC CTGCGCGATT TTAACCTCGA AGTGAATGAA GGCGAGTTTG TTGCGGTCAC TGGTCCTTCT GGCTCAGGTA AAACGACTTT TTTAAATATC GCGGGTTTGC TTGAAGGTTT TACCCACGGT GATTATTTTC TCGATGGCAT CAACGTGTCT AACCTGAGCG ATAACAAGAG CGCCGCCATT CGTAACGAGA AAATCGGCTT TATCTTCCAA GGTTTTAACT TAATTCCCGA CCTTAACTTG GCTGAGAATA TTGAAGTGCC ACTGCGCTAC CGTGGTTTTA ATGCCAAGGA ACGCCAACGC CGCGTACAGC AGGCATTAGA ACAAGTGGGT TTAGCCTCAC GACTCAAGCA TTTTCCCACT CAGCTTTCGG GCGGACAGCA ACAAAGGGTG GCGATTGCCC GCGCATTAGC CGGTGAACCG CGTTTTCTGC TCGCCGATGA ACCAACGGGT AACCTCGACA GCTTAATGGC GCGCCAAGTG ATGGAATTAC TTGAAAATAT TAATCAAGCG GGCACGACTA TTATCATGGT GACCCACGAC CCTGAACTCG CTCGCCGTGC CCAGCGCAAT ATTCAAATCG TCGATGGTCA AGTGTGTGAT TTTACTATGT ATCAGCCCCA TGGCAGTGTG CAAACTGCAG CTTCGCACCC ATTAGATAAA CTTGTCGCCA ACGCTGACTA A
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Protein sequence | MLSMKSVSKV FKTDLVETHA LRDFNLEVNE GEFVAVTGPS GSGKTTFLNI AGLLEGFTHG DYFLDGINVS NLSDNKSAAI RNEKIGFIFQ GFNLIPDLNL AENIEVPLRY RGFNAKERQR RVQQALEQVG LASRLKHFPT QLSGGQQQRV AIARALAGEP RFLLADEPTG NLDSLMARQV MELLENINQA GTTIIMVTHD PELARRAQRN IQIVDGQVCD FTMYQPHGSV QTAASHPLDK LVANAD
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