| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1029 |
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| Symbol | |
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| ID | 5752750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 1225417 |
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| End bp | 1226724 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641287293 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001553465 |
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| Protein GI | 160874149 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.981321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCTCCG GCACTGATGA TTCCGACAGG GAAGCGAGTA AAGCCATGAT TAAAGATACT
AGCGGCCAAG ATACCGTACT TGTGCCATCG TCCACTAAAC GTCTTAAGTT ACCTCTGTTG
ATCGGCGGTT GCGCCTTATT AGTCAGCGCC TTAGTGTGGG CTAGCTTGGG CACAGATAGC
GTGAGCAAAT CCTTAAGCCG CAGCGACATC ACTACCGCAA AACTCTTCGT TGGAACGTTA
ACCCGCGATG TTGCGACCAC AGGTAAAATC GTGGCGGCGA ATGCGCCTAT TTTGTATAGC
ACAGAGGAAG GCACAGTCAC TCTGCTGAGT AACCCTGGCG ATAGCGTCAA TAAAGGCGAT
GTGGTTGCCA AACTCGATAG CCCAAGATTA ACCAATCAGT TGGAGCAGGC AGAATCGATA
TTGGCAGGTA TGCAGAGTGC GTTAGAGCGT GCCAAGTTGG ACGCCAGACG CGACCAACTG
CAAGTGAATC AAACCTTAGA CATGGCCGCG GTGGATTTAG AAGCCGCTGA CAGAGAACGT
CGCCGTGGTG AGTTGTTAAT TAAAAATAAG CTGATCAGCG AAATCGATTA CGAGAAAGGT
AAGGACGATT TACACAAGGC TAAGCTCAAG TTTGCCCATG CTGAGCAGGA AGTGGCGCTA
ACAAAAGACA CCCTGACCTT CGAAATTAAA AACAAAGCCT TAGAAGTCGA GCGCCAAATC
CTAGCCGTGC ACGAGCTCGA ACGCCAAGTT GAGGCCCTGA ATATCAAAGC CCCCGTGGGC
GGCATTATCG GCAACTGGAT CACCGAGCAG AAAACCCGTC TTAGCGCTAA CCAACCAATT
CTAACCGTTG TGGATTTAAG CGCCTATGAG GCCGAGCTTG CGGTGCCAGA GTCCTATGCC
GACGATCTGG GTTTAGGCAT GGAAGTTGAG CTCAGTTTCG GCAGCGTGAA GTTAATGGGC
AAGTTATCGT CTATCTCCCC CGAAGTACGT AACCGTGAAG TGACCGCAAG AGTGCAGTTC
GTTCAAGATA ACAGCTTGAA ACTGCGTCAG AACCAACGAA TCTCCGCCCG AGTCTTGTTA
GAGCACAGAC CCGATGTGTT GATGGTGAAA CGCGGCGCCT TTATGACCAG CGGCGGTGGC
GATGAGGTGT ACCAAATCGA GGGCGATCTA GCCAGCCGCC GCGCGATCAA ACTCGGCAGT
ACGAGCCTGA GCCAAGTCGA AGTGCTGGAT GGCGGCAAAG CCGGAGATGA GTGGGTGACA
TCCAGTGTCG AGCCCTTTAA TCACGCCGAA CAGGTCAGGA TTCATTGA
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| Protein sequence | MRSGTDDSDR EASKAMIKDT SGQDTVLVPS STKRLKLPLL IGGCALLVSA LVWASLGTDS
VSKSLSRSDI TTAKLFVGTL TRDVATTGKI VAANAPILYS TEEGTVTLLS NPGDSVNKGD
VVAKLDSPRL TNQLEQAESI LAGMQSALER AKLDARRDQL QVNQTLDMAA VDLEAADRER
RRGELLIKNK LISEIDYEKG KDDLHKAKLK FAHAEQEVAL TKDTLTFEIK NKALEVERQI
LAVHELERQV EALNIKAPVG GIIGNWITEQ KTRLSANQPI LTVVDLSAYE AELAVPESYA
DDLGLGMEVE LSFGSVKLMG KLSSISPEVR NREVTARVQF VQDNSLKLRQ NQRISARVLL
EHRPDVLMVK RGAFMTSGGG DEVYQIEGDL ASRRAIKLGS TSLSQVEVLD GGKAGDEWVT
SSVEPFNHAE QVRIH
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