| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1028 |
|---|
| Symbol | |
|---|
| ID | 5752749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 1224054 |
|---|
| End bp | 1225085 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641287292 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_001553464 |
|---|
| Protein GI | 160874148 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0418] Dihydroorotase |
|---|
| TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAA TAACAATCAC TCGCCCAGAC GACTGGCATA TTCATTTAAG AGACGGCGCC
CAGCTTAAAG ATACCGTGCG CGACATCAGC CGCTATATGG GCCGCGCCAT CGTGATGCCA
AACTTAGTGC CCCCCGCTAT CGATACCGAA ACCGCACTGA CTTATTACGA CCGCATTAAA
GCGCAGGTGC CAGCGGGCTC ACAGTTCGAA CCTTTGATGG TGTTGTATTT AACTGACAAA
ACTAGCCCAG ATGAAATCCG CAGAGCCAAA GCTTCGGGTA AAATTGTCGC CGCGAAACTC
TACCCTGCGG GCGCGACGAC CAACTCGGAT TCAGGCGTAA CCGATTTGAA GAACATCTAC
CCAGCCCTCG AAGCCATGCA AGAAGTCGGT ATGTTGTTTT TAGTGCACGG TGAAGTCACG
GATTCATCGA TTGATATTTT CGACCGCGAG CGCGTTTTTA TCGAAAATAT CCTCAGCAAA
ATCGTTGCCG ATTTCCCAGA ACTTAAAATC GTACTTGAAC ATATCACCAC TAAAGATGCG
GTCGATTTTG TCACCCAAGC CTCTGATAAT GTAGCCGCGA CTATCACAGC TCACCATTTA
CTGTATAACC GCAACCACAT GTTGGCGGGC GGTATTCGCC CACATTTTTA CTGCCTACCG
ATTTTAAAAC GCAATACCCA CCAGCAGGCG TTATTGGCCG CTGCAGCAAG CGGTAGCAAG
AAGTTCTTCT TAGGCACAGA TTCGGCGCCC CACGCTAAAG ATAAGAAAGA AGCCGCCTGT
GGCTGCGCGG GTTCGTACAC GGCCCATGCC GCCATTGAGC TGTATGCCGA AGCCTTCGAA
TCGGTGAATG CGCTAGATAA ACTCGAAGCA TTTGCAAGCT TCAATGGCCC AGATTTTTAC
AATCTGCCAC GTAACGCCGA CACGATCACG CTAGTGAAAA AACCATGGAA TGTCCCTGCA
ACTTACCCGC TGGGCGACAC TAACGTAGTG CCGATTCGTG CAGGCGAAGC CATTGATTGG
CAGGTTGAGT AA
|
|---|
| Protein sequence | MTTITITRPD DWHIHLRDGA QLKDTVRDIS RYMGRAIVMP NLVPPAIDTE TALTYYDRIK
AQVPAGSQFE PLMVLYLTDK TSPDEIRRAK ASGKIVAAKL YPAGATTNSD SGVTDLKNIY
PALEAMQEVG MLFLVHGEVT DSSIDIFDRE RVFIENILSK IVADFPELKI VLEHITTKDA
VDFVTQASDN VAATITAHHL LYNRNHMLAG GIRPHFYCLP ILKRNTHQQA LLAAAASGSK
KFFLGTDSAP HAKDKKEAAC GCAGSYTAHA AIELYAEAFE SVNALDKLEA FASFNGPDFY
NLPRNADTIT LVKKPWNVPA TYPLGDTNVV PIRAGEAIDW QVE
|
|---|
| |