Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1023 |
Symbol | |
ID | 5752744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1218261 |
End bp | 1219718 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641287287 |
Product | transcriptional regulator |
Protein accession | YP_001553459 |
Protein GI | 160874143 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.582702 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT CACAATCCAA CTTCCCTCAC TTGCAACTCA AAGATGGCAC CCTCAAAGAC CAGCTTTACC ATGCCTTTAG AGAGGCGATT CTCGATGGAC GCTTGCATCC TAGCATGAAG CTGCCCTCCA GCAGAGCCTT ATCGGAAACC ATGCAGATTT CGCGAAACTC AGTACTGCAA GGGTTTGATC GCCTGATTGA TGAAGGCTAC CTGCTGACTA AGCCAGGTTC AGGCACCTAT GTGTCTGATA CGATTCCCGA CGAACTGATC GCTATCCCAA ACCGCAGTGA TGTCAGTATT CAAGCCTTTG ATTCTGCATT GGAACTCAAT CCACAGTTAC TGGAGATGGC GCGACTGAGG GACAATGGAA ATACCCGCCA CAGCATGTTC AACATTGGCG TGGGATGTGT AGATCTTTTC CCACACCAAC TTTGGGGCCG CCTGCTAGGC AGGGTCTGGC GACAATCGCG CAAAACGCAG GGGAAACATA GCCATAGTGC TGGGCATTTA CCATTGCGCG AAGCGATCAG CGACTATGCC CGTTCAACCC GAGGGCTAAA TTGCACGCCC GAGCAAATCA TCATAGTCAA TGGCACTCAG CAAGCCATTA ATCTCACGGC ACAGGTACTG CTACAACAGG GAGATGAAGT CTGGCTCGAT GAACCCGGAT ACGACGGCGC CTTAGGCGCT TTTCTCTCGC AAAACCTGCA AGTCCGCCCC GTTAGCCTTG ATGATGAAGG CACAAAGATA GCCGAGGCAA TACAGCAATG GCCCTCGGTA AAACTGGCTT TTACCGCACC TTCGCATCAG TTCCCCCTCG GCGGAACTTT GAGTCTGCCA CGGCGATTAG CCTTACTCGA TTGGGCCGCT GAGCAGAATA AGTGGATTTT AGAAGATGAC TATAATAGCG AGTTTCGTTA TAGCGCCCGC CCGATACAGG CATTGCAGGG ACTCGATAAA CAACAGCGAG TGATCTACGC AGGCACCTTT TCCAAGATGT TATTACCAGA GCTACGACTC GGCTTTCTCG TCGTTCCGCC TAAACTGGTG GACGCCTTTA ACCTTGCCAA ACATTACGCC GACTCGCATA CGGCTTACCT AGAACAAGCC ACATTGGCGC TGTTTATCGC AGAGGGACAT TACGCGCGGC ATGTACGGCG AGTTCGAAAA GCTTGTTTAG CGCGCCAAAC GGCGTTAATC ACTGCAATTG AGCAGTATCT GCCCGACAAA TTGTCAGTTC AGACCTCAGA TTCAGGGATT CACCTCGTGT GTTGGCTAAA AGGCGACTTG ACCGAAGACG AAGTGATCAA CAAATGCCGC CAGCTCAGCT TGGGGGCGCA GCCTTTGTCT CGGTATTGCC AAGCGCCCTA TCCAAGGCAA GCGATCTTAC TGGGTTATGC AGCCCATACG CCCGATGAGC TGCGGGAAAA TATTAAAAAA CTCGCCCAAG TCCTTTAA
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Protein sequence | MKKSQSNFPH LQLKDGTLKD QLYHAFREAI LDGRLHPSMK LPSSRALSET MQISRNSVLQ GFDRLIDEGY LLTKPGSGTY VSDTIPDELI AIPNRSDVSI QAFDSALELN PQLLEMARLR DNGNTRHSMF NIGVGCVDLF PHQLWGRLLG RVWRQSRKTQ GKHSHSAGHL PLREAISDYA RSTRGLNCTP EQIIIVNGTQ QAINLTAQVL LQQGDEVWLD EPGYDGALGA FLSQNLQVRP VSLDDEGTKI AEAIQQWPSV KLAFTAPSHQ FPLGGTLSLP RRLALLDWAA EQNKWILEDD YNSEFRYSAR PIQALQGLDK QQRVIYAGTF SKMLLPELRL GFLVVPPKLV DAFNLAKHYA DSHTAYLEQA TLALFIAEGH YARHVRRVRK ACLARQTALI TAIEQYLPDK LSVQTSDSGI HLVCWLKGDL TEDEVINKCR QLSLGAQPLS RYCQAPYPRQ AILLGYAAHT PDELRENIKK LAQVL
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