| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1007 |
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| Symbol | metH |
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| ID | 5752728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 1198732 |
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| End bp | 1202466 |
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| Gene Length | 3735 bp |
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| Protein Length | 1244 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641287271 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_001553443 |
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| Protein GI | 160874127 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATAC CCTCTACCAA AGCCGGCCAG ATATTGGCAG ACATTCGTAA ACAGCTTGCT
GAGCGCATTC TAATCTTAGA CGGTGCCATG GGCACTATGA TCCAAGACCA CAAGCTCGAA
GAAGAGGATT ATCGCGGCGA ACGCTTTAAA GATTGGCACA CTGACGTCAA AGGCAACAAC
GATTTATTGG TGTTATCGCA ACCCCACATC ATCAAACAGA TTCACACCGA CTACTTAAAC
GCCGGTGCCG ACATCATTGA AACCAACACC TTTAATGCTA CTACTATCGC CATGGCCGAC
TACGACATGC AGTCGCTGTC CGCCGAAATT AACTTAGCCG GCGCCCGTCT TGCCCGTGAA
GCCTGTGATG AAGTGTTTGC TGCCACAGGC ATTCCGCGCT ACGTCGCTGG TGTGTTAGGC
CCCACTAACC GTACGTGTTC GATTAGCCCA GATGTGAACG ACCCTGGCTA TCGCAACGTC
AGCTTCGATG AGTTAGTCAG CGCTTACCGA GAATCCACTA AGGCGCTGAT TGAAGGCGGC
GCGGATATCA TTATGGTCGA GACCATATTC GATACCTTAA ATGCCAAAGC CGCACTGTTT
GCGATTGAAT CGGTATTTGA TGACTTATTT GGTCAGCATT CTAAAGACAG ATTGCCAATC
ATGATTTCGG GCACTATTAC CGATGCCTCA GGCCGTACCC TTACGGGTCA AACCACCGAA
GCCTTTTATA ATTCCCTGCG CCATATCAAG CCCTTATCTA TCGGCCTTAA CTGTGCGCTT
GGGCCAAAAG AGCTGCGCCC GTATGTGGAA GAATTATCGC GCATCAGTGA GTGTTATGTG
TCGGCGCATC CGAACGCGGG CCTGCCGAAC GAATTTGGCG GCTACGATGA AACCCCAGAA
GACATGGCGA ATGTGATCGA AGATTGGGCG CGCGAAGGCA TGCTCAATAT TATCGGTGGT
TGCTGTGGTA GTACGCCTGA ACATATCCGC GTTATTCGCG AAGCGGTCGA CAGACATAAC
CCGCGCGTTT TACCCGATAT CCCCGTCGCT TGCCGCTTAG CCGGTTTGGA ACCGCTGACT
ATCGATGCAC AATCCCTGTT CGTTAACGTG GGTGAGCGCA CCAACGTCAC AGGTTCGGCC
AAGTTTTTAA AGCTGATCAA AGACGGTAAG TTTGAGCAAG CGCTCGATGT AGCCCGCGAG
CAGGTTGAAA GCGGCGCGCA GATCATCGAC ATCAACATGG ACGAAGGCAT GCTCGATGGC
GCCGAGATCA TGCACAAGTT TTTAAACTTG ATAGCCTCTG AGCCCGACAT CAGCCGCGTG
CCGATTATGA TCGACTCCTC TAAGTGGGAA GTGATCGAAG CTGGCCTCAA ATGCATTCAA
GGCAAGGGCA TAGTTAACTC GATTTCCCTT AAAGAAGGCG AAGCCAAGTT TATTGAGCAA
GCCACCTTAG TAAAACGCTA CGGCGCGGCG GCCATTATCA TGGCGTTCGA CGAACAAGGT
CAGGCCGATA CTAAGGCACG TAAAATCGAA ATCTGTACCC GCGCCTATCG GGTTCTGGTC
GATAAGGTCG GCTTTCCGCC AGAAGACATC ATCTTCGACC CGAACATTTT TGCCATCGCC
ACGGGTATCG ATGAACACGA CAACTATGCC GTCGATTTTA TTGATGCCAT TAAAGCGATT
AAAGCCACCC TGCCCCACGC AATGATTTCG GGCGGCGTAT CAAACGTGTC GTTCTCGTTT
CGCGGTAACA ACCCAGTGCG CGAAGCGATT CACGCGGTAT TCCTGTACCA TGCCATCAAA
GTCGGCATGG ACATGGGCAT TGTCAACGCG GGCCAGTTAG CCATTTACGA CGATATCGAT
CCTGAGCTTA AAGTACGAGT CGAAAACGTG GTGCTTAACT TGCCCTGCCC AGTCGAAGGC
TCAAGCAATA CCGAGCAGTT ACTTGAAATC GCGGAGAAAT TCCGCGGTGA TGGCGCGCAG
GTGGGTAAGA AAGAAGATTT AGAATGGCGC AGCTGGCCGG TTAGCCAACG CTTATCCCAT
GCGCTCGTCA AAGGCATTAC CGAATTTATC GATGAAGATA CCGAAGCCGC TCGCCAAGAA
GCGAAACGTC CGCTGGATGT GATTGAAGGC GCCTTGATGG ACGGCATGAA CGTGGTCGGT
GACTTGTTCG GCTCGGGTAA GATGTTCCTG CCACAGGTGG TGAAATCGGC GCGAGTGATG
AAAAAAGCCG TGGCTTACTT AAACCCCTAT ATCGAGCTGG AAAAGGTCGA AGGCCAATCT
AACGGCAAGA TTTTGATGGT GACAGTAAAA GGAGACGTGC ACGATATCGG CAAAAATATC
GTCGGCGTGG TGCTCGCCTG TAACGGTTTT GAGGTATTCG ATTTAGGTGT GATGGTGTCG
GTGGAGCGAA TTCTCGACGC TGTGAAAGAA CACAATATCG ATATCATCGG CATGTCGGGC
CTCATCACGC CGAGTCTGGA CGAGATGGTG CATAACGTGA AAACCTTCCA CCGTGAAGGC
TTAACCATTC CGGCGATCAT CGGCGGCGCG ACTTGCTCTA AAATCCACAC AGCGGTGAAG
ATTGCGCCCC ATTATCCCCA TGGCGCCATT TATATCGCCG ATGCGTCCCG CGCCGTGCCT
ATGGTGAGTA AGCTCATCAA CAACGAGACC CGCCAAGCGA CCATAGACGA AACCTATGCC
GAATACGACG ACATGCGCAC TAAGCGTTTA TCTCAAGCCA AGCGCAAAGA AATAGTGTCA
CTCGAAGCGG CGCGTGATAA CCGCTGCCAA CACGATTGGG CCAACTACAC CCCGTTCACG
CCAAACGTGC TCGGGCGCCA AGTCTTTGAT AATTATCCAT TAGAAGATTT AGTTGAGCGT
ATCGACTGGA CACCGTTTTT CCGCTCGTGG GAATTGCATG GCCATTACCC TGAAATCCTC
ACCGATAAAG TGGTCGGCGT CGAGGCGCAA AAGCTATTCG CCGATGGTCA GGCCATGCTC
AAACAAATCA TCGAAGAAAA GTGGCTCACG GCGAAAGCGG TTATTGGCTT ATTCCCTGCC
AATACCGTCA ATTACGACGA CATTGAGCTG TATACTGACG AGTCGCGCAC CACAGTTGAA
ATGACCACAC ATCACCTGCG GATGCAGCTT GAGCGTGTCG GTAATGACAA CTTCTGCCTA
TCTGACTTTG TTGCGCCAAA AGACTCTGGC GTCGCCGATT ACATGGGCGG CTTTGCGGTG
ACCACGGGCC ACGGCATAGA CGAACATGTG GCGCGTTTTG AAGCCAACCA CGACGACTAC
AACGCCATCA TGCTCAAGTG CTTAGCCGAC CGTTTGGCCG AAGCCTTTGC CGAGCGGATG
CACGAACGGG TGCGTAAAGA GTTTTGGGGT TATGCGGCCG ACGAGCAGTT AAGCAACGAA
GCCTTAATCC GCGAGAAATA CAAAGGTATA CGCCCCGCAC CGGGTTACCC AGCATGCCCA
GATCATACAG AAAAAGGCTT GTTATGGGAC TTGCTCAAGC CCGATGAAAC TATCGACTTG
AACATCACCG AAAGCTACGC CATGTTCCCC ACAGCGGCAG TATCGGGCTG GTATTTCGCC
CACCCGAAAT CGCGCTACTT TGGCGTGAGT AACATAGGCC GCGATCAAGT GGAAGATTAT
GCCAAGCGTA AAGGGATGAG CATTGCGGAA ACGGAGAAGT GGCTGGCGCC AGTGTTGGAT
TATGATCCCG AGTGA
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| Protein sequence | MTIPSTKAGQ ILADIRKQLA ERILILDGAM GTMIQDHKLE EEDYRGERFK DWHTDVKGNN
DLLVLSQPHI IKQIHTDYLN AGADIIETNT FNATTIAMAD YDMQSLSAEI NLAGARLARE
ACDEVFAATG IPRYVAGVLG PTNRTCSISP DVNDPGYRNV SFDELVSAYR ESTKALIEGG
ADIIMVETIF DTLNAKAALF AIESVFDDLF GQHSKDRLPI MISGTITDAS GRTLTGQTTE
AFYNSLRHIK PLSIGLNCAL GPKELRPYVE ELSRISECYV SAHPNAGLPN EFGGYDETPE
DMANVIEDWA REGMLNIIGG CCGSTPEHIR VIREAVDRHN PRVLPDIPVA CRLAGLEPLT
IDAQSLFVNV GERTNVTGSA KFLKLIKDGK FEQALDVARE QVESGAQIID INMDEGMLDG
AEIMHKFLNL IASEPDISRV PIMIDSSKWE VIEAGLKCIQ GKGIVNSISL KEGEAKFIEQ
ATLVKRYGAA AIIMAFDEQG QADTKARKIE ICTRAYRVLV DKVGFPPEDI IFDPNIFAIA
TGIDEHDNYA VDFIDAIKAI KATLPHAMIS GGVSNVSFSF RGNNPVREAI HAVFLYHAIK
VGMDMGIVNA GQLAIYDDID PELKVRVENV VLNLPCPVEG SSNTEQLLEI AEKFRGDGAQ
VGKKEDLEWR SWPVSQRLSH ALVKGITEFI DEDTEAARQE AKRPLDVIEG ALMDGMNVVG
DLFGSGKMFL PQVVKSARVM KKAVAYLNPY IELEKVEGQS NGKILMVTVK GDVHDIGKNI
VGVVLACNGF EVFDLGVMVS VERILDAVKE HNIDIIGMSG LITPSLDEMV HNVKTFHREG
LTIPAIIGGA TCSKIHTAVK IAPHYPHGAI YIADASRAVP MVSKLINNET RQATIDETYA
EYDDMRTKRL SQAKRKEIVS LEAARDNRCQ HDWANYTPFT PNVLGRQVFD NYPLEDLVER
IDWTPFFRSW ELHGHYPEIL TDKVVGVEAQ KLFADGQAML KQIIEEKWLT AKAVIGLFPA
NTVNYDDIEL YTDESRTTVE MTTHHLRMQL ERVGNDNFCL SDFVAPKDSG VADYMGGFAV
TTGHGIDEHV ARFEANHDDY NAIMLKCLAD RLAEAFAERM HERVRKEFWG YAADEQLSNE
ALIREKYKGI RPAPGYPACP DHTEKGLLWD LLKPDETIDL NITESYAMFP TAAVSGWYFA
HPKSRYFGVS NIGRDQVEDY AKRKGMSIAE TEKWLAPVLD YDPE
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