| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0993 |
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| Symbol | |
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| ID | 5752714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 1176795 |
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| End bp | 1178420 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641287257 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001553429 |
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| Protein GI | 160874113 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATGTAC TGCTAAAAAA ACTTCAACTG ATCTATTTTC CCTTCTTATT CACGAGCCTG
TTATTTATCT CTGGCTATAG CTTAATCCAT TGGCTGTTGT TGATTAAATT TGAGTTTTTT
AGCATAGATG AAGATCTGGT CAATTTTGGA TTACCGCTGA TACTGTCATG GCTCTTGTTG
CTTGTTTTTC TGAGGCCAAG GCTAAAACTG CTGAAGTTTG TTAAGGATAA TTCACGCTTT
TACTATCTAC TTTTCGCCGT GCAGCTCGTG GCTGTGCCTT GTATTATTGC GCAGGAATAT
CTTAAAACAG CAACGGGTCA GTTAACCCAA TTAGCATCGA TCCAAGAATT GTATCTGCAT
AAAAAGACAC AGTATTACCA GTTACAGCAA GCTTATATTG ATAAGACGCA AATTGGTGTG
CAGCGAAAGA TTGAGGTGAC AGGAAAAAGT AACAGTCACT TGAATATGAC GCTCTATATT
GCGATGCCGA TTTTTGCGAG TGGCGCCGAT CGTCGCCGAA CTTCTGTCTT AGCCTGGTAT
GGCAAAACTT ATCAGCAGGA GATCAGTAAT AGACTCGAAC CCGATGAAAA AGAACAAGCA
TACAAGGCGT TTTTGACTCA ATCCCAACGT GAGTTTGATA AGTTTGACCC GCAAACGTTT
GTTTACCTTG AACGGTTAGC CCCTTCGTCT CTTAAGAGAG ACTTACTTAG CGCAGCGGAA
AAAAGTCCGC TTTATCAAGC TGAATACCCA ACGATTTTTA TGCCGAAGTT TGAGCCATTT
GAAGCCCGTA ATGGCCATAA ACTCGCTTGG ATGCTGATTT GGTTTGTTGC AGGTGCGTTA
GTCTGGTTTG TGCTCTTGCT GCGGGTGAAA CTGGATGAAG AGGTTCTTAA GGCTGAAACA
GTTACAAAGC GTTTGAACCA TGCGGGCACA ATCGCCGAGC TTAACGATTT TTTTGAAATG
ATACGGCCCA AGCCGGGTTT TATTGCAACT CCTATTCTGA TGTATTTCAA TGTATTAGTG
TTTATCCTTA TGGCATGGTC AAGCCAACAT TTTATTAACT TACAGGGTAG TTTTCTGCTC
GAATGGGGGG CTAACTTTCG GCCTAAAGTG CTTGCTGGTG AGTGGTGGCG CTTAATTACG
AGTACCTTTA TCCATGGCGG TTTAGCCCAC TTAGCGCTGA ATCTTTACGG CTTGTTTTTT
GTCGGCAGCT TTCTTGAACC TGTACTCGGT AAGTGGCGAC TATTTTTGGC GTATTTGATC
ACTGGGATAT TAGCCAGTAT CGCCAGTATC TGTTGGTATG ATGCCACTGT GAGTGTCGGT
GCATCGGGCG CCATTATGGG GCTATTAGGT ATACTCGTGA TTTGGGCTTG GAAAAAGATT
TTCCCTGAGG ATATCAACTG GATATTGAGT ATTAATTTGG CATTTTTTGT GACCATAAGT
CTGGTCGCCG GATTATTGGG TGGAGTGGAC AATGCTGCCC ATGTTGGCGG ATTGCTGAGT
GGGTTAGTGG TTGGTTACCT TTCGCTGCGC TATGCTCAGC GGGCTCAGGG GGATCGAGGT
GCTCAGAGAG CTCGGAAGAT TGAGGGCCAT AGTCCAGCTA AAAAACGTAA GCCGAGACGC
AAATAA
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| Protein sequence | MDVLLKKLQL IYFPFLFTSL LFISGYSLIH WLLLIKFEFF SIDEDLVNFG LPLILSWLLL
LVFLRPRLKL LKFVKDNSRF YYLLFAVQLV AVPCIIAQEY LKTATGQLTQ LASIQELYLH
KKTQYYQLQQ AYIDKTQIGV QRKIEVTGKS NSHLNMTLYI AMPIFASGAD RRRTSVLAWY
GKTYQQEISN RLEPDEKEQA YKAFLTQSQR EFDKFDPQTF VYLERLAPSS LKRDLLSAAE
KSPLYQAEYP TIFMPKFEPF EARNGHKLAW MLIWFVAGAL VWFVLLLRVK LDEEVLKAET
VTKRLNHAGT IAELNDFFEM IRPKPGFIAT PILMYFNVLV FILMAWSSQH FINLQGSFLL
EWGANFRPKV LAGEWWRLIT STFIHGGLAH LALNLYGLFF VGSFLEPVLG KWRLFLAYLI
TGILASIASI CWYDATVSVG ASGAIMGLLG ILVIWAWKKI FPEDINWILS INLAFFVTIS
LVAGLLGGVD NAAHVGGLLS GLVVGYLSLR YAQRAQGDRG AQRARKIEGH SPAKKRKPRR
K
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