Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0989 |
Symbol | |
ID | 5752710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1173416 |
End bp | 1173850 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641287253 |
Product | LrgA family protein |
Protein accession | YP_001553425 |
Protein GI | 160874109 |
COG category | [R] General function prediction only |
COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTCC CACAAGCCGC AATACGTCAG TGTCGACATT GGGCTTTGTT ATTAACCCAA ATCGGCCTCT TCTGTTTACT GTCCTTCGCT TGTCACTGGT TCGCCACTTG GGCACATTCT CCTATTCCTG GGAGTGTGAT TGGCTTAGGC ATACTCTTAT TTTTATTAGG TTTTAAACTC ATCCCCGAAA ATGCGGTACA ACTGGGTGCC GCTTGGTTGA TTGGTGAATT ATTGCTGTTT TTTATCCCGC CTGTGATTTC GGTCATTAAG TACGAAGGTT TATTTGAGCA ATACGGTACC AATATATTGT TCACTTTAGT GATGGGCAGT GTGTGTGTGA TGTTTGGTAC TGGCTTTGTA GTCGACAGAG TGTTTCGTTT TGAGCGCCAA CTGAACATCA AAAAGCAGGC CCGTCGCCAC GCTAAGGCAG CTTAG
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Protein sequence | MSFPQAAIRQ CRHWALLLTQ IGLFCLLSFA CHWFATWAHS PIPGSVIGLG ILLFLLGFKL IPENAVQLGA AWLIGELLLF FIPPVISVIK YEGLFEQYGT NILFTLVMGS VCVMFGTGFV VDRVFRFERQ LNIKKQARRH AKAA
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