Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0986 |
Symbol | |
ID | 5752707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1170409 |
End bp | 1171143 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641287250 |
Product | extracellular solute-binding protein |
Protein accession | YP_001553422 |
Protein GI | 160874106 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGT CCATGTTATT AGGCGGCCTG ACCTTAACTG CCACCTTGTT GTTAGCTGGA TGCGGAAAAA GCGATGACGT GTTAGTCGTT GGCACTAATG CCGCCTTCCC TCCTTTTGAA TATGTTGGCG GCCAAAGTGG CGATGAAATC AAAGGCTTTG ATATCGATCT GGCCAAGCAA ATCGCTAAAG ATGCGGGCAA GACGCTCAAA GTCGAAAACA TGAAGTTCGA TTCACTGATC GTCGCGCTTA ATTCAGGCAA GATTGATTTT ATCGCCTCAG GTATGACGAT TACCGCTGAA CGTCAAGCAA ACGTAAACTT CTCTGAGCCT TACTACGAAG CGACTCAAGT CGTACTCGTC AACAAAGATA ACGATAGTAT TCATACGCTT GAAGATATTA AAGGCAAACA CTTTGCGGTG CAGTTAGGCA CCACCGCTGA CATTATGTCG AAAAAGTATA CCCAAAATAT CACCGCCTTT AATACGGGTT TTGAAGCCAT TATGGAGCTT AAAAATGCAA AGGTGGATTT AGTGTTATTC GACAGCGAAC CTGCCGCTAA CTATCTGGCT AAAAATCCTG AATTAAAGAT GATCAAACTG GATTTTCCTG CTGAGTTTTA TGGTTTCGCC GTATCAAAAG AGCAACCTGA ACTGTTGGCG AGCATCAATA AAACACTGGC TAACATGAAA GCCGACGGCC AATATCAGAC GCTCGTTTCT GCCCATATAA AGTGA
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Protein sequence | MKKSMLLGGL TLTATLLLAG CGKSDDVLVV GTNAAFPPFE YVGGQSGDEI KGFDIDLAKQ IAKDAGKTLK VENMKFDSLI VALNSGKIDF IASGMTITAE RQANVNFSEP YYEATQVVLV NKDNDSIHTL EDIKGKHFAV QLGTTADIMS KKYTQNITAF NTGFEAIMEL KNAKVDLVLF DSEPAANYLA KNPELKMIKL DFPAEFYGFA VSKEQPELLA SINKTLANMK ADGQYQTLVS AHIK
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