Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0964 |
Symbol | |
ID | 5752685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1143601 |
End bp | 1145325 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641287228 |
Product | TrkA domain-containing protein |
Protein accession | YP_001553400 |
Protein GI | 160874084 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGACT TGTGGCTGTT AGCGATTATT TTGTTAGGTC TTGTGGCTGG CTTAATTAGC GGCCGTATCA ATCCAGCGGT ATTGTTTTTA TTTGCATTTT TGCTCTGTTA TTTGCTTGGC ATGGTTGCGC TCGATACCGC ATTAACAAGC TTTACAAATA TTGGCTTAGT CACACTCGTC CTGTTGGTAT TGGCCGCGAC GGCGTTAGAA AAAACCTCCC TGCTGGGAAA GTTGAGTCAA GTCATAGGCA ATAGTTCTTT GCCTATGACA ATGGCAAAGC TTGGGCTATC GACCGCCTTG CTGTCGTCCT TTACCAATAA CACTGCGGTG GTGGCGTCGC TTATCGGGGT TGTGCGTCGC AATCAAGCAC ACGCACCCGC TAAGTTATTA TTGCCATTAA ATTATGCGGC AATTTTAGGT GGCACACTGA CCCTGATTGG TACCTCGACC AACTTGATTG TGAACTCTTT TGTGGAAAAC GCCGGCTTAC CCGCCTTAGG TTTCTTCGAG TTCACGCCGG TCGCGGTTGT GATCGTCGTC GCTGGTATGT TGTTATTGAT CTTACTAGCG AACATTCTGC CAGACAGACG GGAAGAGTCG GGTGAAGAGG CGCTGCCTTA CTTGCTCGAA GCCCATGTGG CAAAAGGCTC ATCCTTAGTG GGTCGCAGTG TGGTGGATAA CAAACTCAGG GCGCTGAAGA AGTTATATCT GGTTGAACTA GAACGCAGCG GCATTTGTAT TTGCCCTGTG CCGCCCCAGT TAGTGCTGCA AGCGGACGAC GTGCTGCGCT TCAGTGGTGC GGTCGAATCG GTTGAGTTAT TGCATCAATT CGATGGTTTA GATTGGTTTG GTAAGCATCA AGCCAAGGGA CAAAATTTAG TTGAAGCAGT GCTCGCGCCA TCATCCCGTT TAGTCGGCAG TTCGTTGAAA GAATCGCGTT TTCGTGAGCA GTTCGATGCG GCCGTGATGG CGATCCGCCG CGGAAATCAT CCGCTGAAGG GCGGGCTTGG CGACATTATT CTGCAACCCG GTGATGTGTT GTTATTGACG CCAGGCGATG GTTTCAGCAA TAGCGCAAAA TTGAGTTCAG AATTTGCGGC GATCAGCGGC TTAGATTTGA ATGTGCGCTT AGACAGTCGC CGTGGTCGTT GGGTATTGCT CGGCTTTGCG GTCACGATCG TTTTGAGTGT CACCGGTGTA TTGCCATTGG CTAAAGGTTT AGTGCTCCTG CTGCTGAGTT ATTTTGTTAT TGGCGCTGTT ACTTTGGCAG AGCTTAAACG CCGTTTTCCA TTGGAACTAG TGGTGATAGT GGGGAGTGCG TTAGGGCTCG CTAACTTGAT GATGAGCACT GGCCTTGCGG ACAGTTTAGC CCAAGGATTA CTCTCGGTTA TCAATGGTTA TGGGGTGTTT GGCGCTTTTG TCGGTGTGTA TTTTATGACC TTGTTGTTGA CTGAATTAGT TACCAATAAT GCTGCCGCAG CGCTGGCTTT CCCTATCGCC TACGCGATTG CGCTTAATTA CGGTGTCGAT GCAAGACCCT TTATTATGGC CGTGGTCTTT GGTGCCAGCG CGAGCTTTAT TTCACCCTAC GGCTATCAAA CCAATTTGAT GGTGTTTAAT GCGGGTAATT ATCGCTTCAG TGACTTCGTC CGCCTAGGAT TGCCGTTATC TGTGCTGTAT TCCCTGATAG TGATATTTAT GGTGCCGATC ATCTTTCCTT TTTAG
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Protein sequence | MSDLWLLAII LLGLVAGLIS GRINPAVLFL FAFLLCYLLG MVALDTALTS FTNIGLVTLV LLVLAATALE KTSLLGKLSQ VIGNSSLPMT MAKLGLSTAL LSSFTNNTAV VASLIGVVRR NQAHAPAKLL LPLNYAAILG GTLTLIGTST NLIVNSFVEN AGLPALGFFE FTPVAVVIVV AGMLLLILLA NILPDRREES GEEALPYLLE AHVAKGSSLV GRSVVDNKLR ALKKLYLVEL ERSGICICPV PPQLVLQADD VLRFSGAVES VELLHQFDGL DWFGKHQAKG QNLVEAVLAP SSRLVGSSLK ESRFREQFDA AVMAIRRGNH PLKGGLGDII LQPGDVLLLT PGDGFSNSAK LSSEFAAISG LDLNVRLDSR RGRWVLLGFA VTIVLSVTGV LPLAKGLVLL LLSYFVIGAV TLAELKRRFP LELVVIVGSA LGLANLMMST GLADSLAQGL LSVINGYGVF GAFVGVYFMT LLLTELVTNN AAAALAFPIA YAIALNYGVD ARPFIMAVVF GASASFISPY GYQTNLMVFN AGNYRFSDFV RLGLPLSVLY SLIVIFMVPI IFPF
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