Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0950 |
Symbol | |
ID | 5752671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1123637 |
End bp | 1124719 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641287214 |
Product | rhomboid family protein |
Protein accession | YP_001553386 |
Protein GI | 160874070 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTCA AATGTCCTGG TTGTCATAAC CATAAAATGC GTGAATATGA GTTTCACGGT GAAAAAGTGG ATACTTGCGA GGCCTGTGGA GGATTGTGGT TTGATAACGG TGAACTCAAC AAAGCGTTGT CGAAGGCTGA CAATGGCGAT GACAAAGTGC GTGTTGAAGA AACACTCGGT GCACATTTAG GTCAGGCTAA GCGCCAATGT GGCCATTGTG AGGTGTCGCT TGAGCGCTAC CACTTGATGG ATGGTTACCA AATAGAAGTC GATGTTTGCC ATAGCTGCAG CGGCATATGG ATAGACAGGG ATGAAAGCGA CAAAGTGGTG AAATCTCCAC TTGTTAAAAA CCTGCTCGCT GAACTGGACG CAAAAATAAG CACTAAGACT TGGATATTCC AATTCTTATC CCAGATGCCA GTTGAGTTTA ACCTCAAGCC GAAAAAGCCG CCTGTAGTGA CCTACTTGTT ACTGGCGCTC AATATTTTGG TTTTTGTTGG CTATGGATTC GATCTGGATA TGACTGATAA CGTGTTTGCT CGTTTTGCAC TACGGGCTGA CGACGTAATG CACGGTAGCC ATGTTTGGAC TCTATTTAGC CATATGTTTT TACACGGTGA TTTAATGCAT CTTGCCGGTA ATATGTACTT TTTATATGTA GTTGGCGATA ACCTCGAAGA TGCGCTTGGC CGCGCCCGCT TTTTTGTGTT GTATTTGGTG TGTGGTTTTG CCGCCGCTGC AACTCAAATT GCTGCCGATC CTGGCTCGAA TATTTATATG GTTGGTGCAA GTGGTGCCAT TGCTGGGTTA TTTGGCATGT ATTTAATGTG GTTTAGACAT GCGAGTCTGA CTTTCATGTT TATCATTTAT CAGAAGAAGC TTTCGCCTAT GGCATTCTTC AGCATCTGGT TAGTCTTTAA TATTATTGGT TTAATTATGG CTGGTGAAGG CGTTGCTTAC TGGGCACATA TCGGTGGTTT TGTCGCGGGT CTGTTGATGG GTATTTTCCT AAAAGACAAA GTGATGCAAG CTAATCCACT GATTGCCATG CTCAACGAAC CTGAGGTTAA GATAGCGCGC TAA
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Protein sequence | MSFKCPGCHN HKMREYEFHG EKVDTCEACG GLWFDNGELN KALSKADNGD DKVRVEETLG AHLGQAKRQC GHCEVSLERY HLMDGYQIEV DVCHSCSGIW IDRDESDKVV KSPLVKNLLA ELDAKISTKT WIFQFLSQMP VEFNLKPKKP PVVTYLLLAL NILVFVGYGF DLDMTDNVFA RFALRADDVM HGSHVWTLFS HMFLHGDLMH LAGNMYFLYV VGDNLEDALG RARFFVLYLV CGFAAAATQI AADPGSNIYM VGASGAIAGL FGMYLMWFRH ASLTFMFIIY QKKLSPMAFF SIWLVFNIIG LIMAGEGVAY WAHIGGFVAG LLMGIFLKDK VMQANPLIAM LNEPEVKIAR
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