Gene Sbal195_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0950 
Symbol 
ID5752671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1123637 
End bp1124719 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content44% 
IMG OID641287214 
Productrhomboid family protein 
Protein accessionYP_001553386 
Protein GI160874070 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCA AATGTCCTGG TTGTCATAAC CATAAAATGC GTGAATATGA GTTTCACGGT 
GAAAAAGTGG ATACTTGCGA GGCCTGTGGA GGATTGTGGT TTGATAACGG TGAACTCAAC
AAAGCGTTGT CGAAGGCTGA CAATGGCGAT GACAAAGTGC GTGTTGAAGA AACACTCGGT
GCACATTTAG GTCAGGCTAA GCGCCAATGT GGCCATTGTG AGGTGTCGCT TGAGCGCTAC
CACTTGATGG ATGGTTACCA AATAGAAGTC GATGTTTGCC ATAGCTGCAG CGGCATATGG
ATAGACAGGG ATGAAAGCGA CAAAGTGGTG AAATCTCCAC TTGTTAAAAA CCTGCTCGCT
GAACTGGACG CAAAAATAAG CACTAAGACT TGGATATTCC AATTCTTATC CCAGATGCCA
GTTGAGTTTA ACCTCAAGCC GAAAAAGCCG CCTGTAGTGA CCTACTTGTT ACTGGCGCTC
AATATTTTGG TTTTTGTTGG CTATGGATTC GATCTGGATA TGACTGATAA CGTGTTTGCT
CGTTTTGCAC TACGGGCTGA CGACGTAATG CACGGTAGCC ATGTTTGGAC TCTATTTAGC
CATATGTTTT TACACGGTGA TTTAATGCAT CTTGCCGGTA ATATGTACTT TTTATATGTA
GTTGGCGATA ACCTCGAAGA TGCGCTTGGC CGCGCCCGCT TTTTTGTGTT GTATTTGGTG
TGTGGTTTTG CCGCCGCTGC AACTCAAATT GCTGCCGATC CTGGCTCGAA TATTTATATG
GTTGGTGCAA GTGGTGCCAT TGCTGGGTTA TTTGGCATGT ATTTAATGTG GTTTAGACAT
GCGAGTCTGA CTTTCATGTT TATCATTTAT CAGAAGAAGC TTTCGCCTAT GGCATTCTTC
AGCATCTGGT TAGTCTTTAA TATTATTGGT TTAATTATGG CTGGTGAAGG CGTTGCTTAC
TGGGCACATA TCGGTGGTTT TGTCGCGGGT CTGTTGATGG GTATTTTCCT AAAAGACAAA
GTGATGCAAG CTAATCCACT GATTGCCATG CTCAACGAAC CTGAGGTTAA GATAGCGCGC
TAA
 
Protein sequence
MSFKCPGCHN HKMREYEFHG EKVDTCEACG GLWFDNGELN KALSKADNGD DKVRVEETLG 
AHLGQAKRQC GHCEVSLERY HLMDGYQIEV DVCHSCSGIW IDRDESDKVV KSPLVKNLLA
ELDAKISTKT WIFQFLSQMP VEFNLKPKKP PVVTYLLLAL NILVFVGYGF DLDMTDNVFA
RFALRADDVM HGSHVWTLFS HMFLHGDLMH LAGNMYFLYV VGDNLEDALG RARFFVLYLV
CGFAAAATQI AADPGSNIYM VGASGAIAGL FGMYLMWFRH ASLTFMFIIY QKKLSPMAFF
SIWLVFNIIG LIMAGEGVAY WAHIGGFVAG LLMGIFLKDK VMQANPLIAM LNEPEVKIAR