| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0864 |
|---|
| Symbol | |
|---|
| ID | 5752585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 1018403 |
|---|
| End bp | 1018840 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641287129 |
|---|
| Product | methylation site containing protein |
|---|
| Protein accession | YP_001553301 |
|---|
| Protein GI | 160873985 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4970] Tfp pilus assembly protein FimT |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAACC CATGGAATCA TGGATTTACC TTAGTTGAGC TTATGGTTAC CGTCGCGATT
ATCAGTATTT TAGGCAGCTT AGCACTCCCT TCGTACCGCG ATGTTATGGC ACGTGAACAG
CTAACCGCAG CCGCGAATGA ATTGGTCTCT AGCTATAAAT TTGCCCGCAG CGAAGCGATA
AAACGCAGCA CTTCAATTAC CCTCACGGCA ACAGAAGCGG GACTTTGGGT CATTAAAGAT
AGCGACGATA ACGAATTGAA GGTTTTTACG CCCCCGACAC GTGGGGTTGC AGTAACAGGA
CTGGCTAGTA TCAGCATCAG TGCCACGGGC AATACAGCCA AAACCAGTAT TTCATTGGCG
AACAGTCAAG GTGAAAACAT GAATTTATGC ATTTTACCGA GCGGCCAAAG TCAGCTTCAG
AGCGGGGATT GTGCATGA
|
|---|
| Protein sequence | MSNPWNHGFT LVELMVTVAI ISILGSLALP SYRDVMAREQ LTAAANELVS SYKFARSEAI
KRSTSITLTA TEAGLWVIKD SDDNELKVFT PPTRGVAVTG LASISISATG NTAKTSISLA
NSQGENMNLC ILPSGQSQLQ SGDCA
|
|---|
| |