Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0841 |
Symbol | |
ID | 5752559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 987034 |
End bp | 987765 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641287104 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001553279 |
Protein GI | 160873963 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000333783 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGTCC CAAGAATTTA TCAACCTCAG CCATTAGCCA TCAATCAACA GCTGAACTTA GACGAAGATG GCGCGGCCCA TATCGGCAAA GTGCTGCGCA TGGGTAACGG CGAACATATC AGCCTATTCA ATGGCGATGG CCATGATTAT CTTGCTGAAA TTGTCGATGC AGGTAAAAAG CATGTCACAG TAAAACTGCT TTCCTGTGAG GCAAATTCAT CTGAGTCGCC ACTCAACTTG CACTTAGGCC AAGTGATTTC CCGTGGCGAT AGAATGGAAT TCACCATTCA AAAATCGGTC GAGCTTGGGG TAAATACCAT TACGCCGCTG TTTTCCGATC GCTGCGGCGT AAAACTCAAT GGCGAACGCC TAGAAAAGAA AATTCAACAA TGGCAGAAAA TCGTCATTAG TGCCTGTGAG CAATCGGGCC GCAGCCAAGT GCCCGTGGTT CGCCCGGCGA TGGACTTGCA TGATTGGTGC AGTGAGCCGA CCTCGGCGCT AAAACTCAAT CTGCACCCAA GGGCCGCACA CGGTATCAAT GGCTTAGATT TAGCCCATAC CCGCGTACGC CTATTAATCG GCCCTGAGGG CGGTTTGTCG GCGGAAGAAA TCGCCATGAC GGAAACCTAT CAATTTACCG ATGTATTGCT TGGCCCCAGA GTGCTGCGCA CCGAAACCGC CTCGCTCACC GCCATTACGG CGCTGCAACT CAGATTTGGT GATTTAGGCT GA
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Protein sequence | MRVPRIYQPQ PLAINQQLNL DEDGAAHIGK VLRMGNGEHI SLFNGDGHDY LAEIVDAGKK HVTVKLLSCE ANSSESPLNL HLGQVISRGD RMEFTIQKSV ELGVNTITPL FSDRCGVKLN GERLEKKIQQ WQKIVISACE QSGRSQVPVV RPAMDLHDWC SEPTSALKLN LHPRAAHGIN GLDLAHTRVR LLIGPEGGLS AEEIAMTETY QFTDVLLGPR VLRTETASLT AITALQLRFG DLG
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