Gene Sbal195_0841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0841 
Symbol 
ID5752559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp987034 
End bp987765 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content51% 
IMG OID641287104 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_001553279 
Protein GI160873963 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000333783 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTCC CAAGAATTTA TCAACCTCAG CCATTAGCCA TCAATCAACA GCTGAACTTA 
GACGAAGATG GCGCGGCCCA TATCGGCAAA GTGCTGCGCA TGGGTAACGG CGAACATATC
AGCCTATTCA ATGGCGATGG CCATGATTAT CTTGCTGAAA TTGTCGATGC AGGTAAAAAG
CATGTCACAG TAAAACTGCT TTCCTGTGAG GCAAATTCAT CTGAGTCGCC ACTCAACTTG
CACTTAGGCC AAGTGATTTC CCGTGGCGAT AGAATGGAAT TCACCATTCA AAAATCGGTC
GAGCTTGGGG TAAATACCAT TACGCCGCTG TTTTCCGATC GCTGCGGCGT AAAACTCAAT
GGCGAACGCC TAGAAAAGAA AATTCAACAA TGGCAGAAAA TCGTCATTAG TGCCTGTGAG
CAATCGGGCC GCAGCCAAGT GCCCGTGGTT CGCCCGGCGA TGGACTTGCA TGATTGGTGC
AGTGAGCCGA CCTCGGCGCT AAAACTCAAT CTGCACCCAA GGGCCGCACA CGGTATCAAT
GGCTTAGATT TAGCCCATAC CCGCGTACGC CTATTAATCG GCCCTGAGGG CGGTTTGTCG
GCGGAAGAAA TCGCCATGAC GGAAACCTAT CAATTTACCG ATGTATTGCT TGGCCCCAGA
GTGCTGCGCA CCGAAACCGC CTCGCTCACC GCCATTACGG CGCTGCAACT CAGATTTGGT
GATTTAGGCT GA
 
Protein sequence
MRVPRIYQPQ PLAINQQLNL DEDGAAHIGK VLRMGNGEHI SLFNGDGHDY LAEIVDAGKK 
HVTVKLLSCE ANSSESPLNL HLGQVISRGD RMEFTIQKSV ELGVNTITPL FSDRCGVKLN
GERLEKKIQQ WQKIVISACE QSGRSQVPVV RPAMDLHDWC SEPTSALKLN LHPRAAHGIN
GLDLAHTRVR LLIGPEGGLS AEEIAMTETY QFTDVLLGPR VLRTETASLT AITALQLRFG
DLG