| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0834 |
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| Symbol | |
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| ID | 5752552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 977653 |
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| End bp | 979104 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641287097 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001553272 |
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| Protein GI | 160873956 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.933668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAA AAATATTTCA TCGACCCTTT TCGCCTCGTA GCTGCGCGAT TGCTGTGGGT
ATGGCTTTGG GAATCACCTT GCTGAGTGGC TGTGGCAGTT TCATGCGTTC AGACTTTGAA
CCGCCCGCAT TGGCGATTCC TGAACAGTGG CAAAACACCA CAGTGAACGA GCAAGTAAAG
GTCGATCCTT GGTGGCAGCA GTTTCATCAG CCTGAGCTTG ATAAGCTGGT TAGCCAAGTG
TTGAGCACCA ACAATGACTT AACGCTGGCG ACCTTAACCC TGCGTAAAGC GCGTTTGCAG
GCAGGACTAA CACGGGACGA TCTGTACCCG CAACTATCGG CCAATCTTGG TACTTCCCAT
AATCAGCCGC TTGATGGCGG CGACGCGACT AAGAGTTACC AAGCCAACTT GTCTGTCAGT
TATGAGGTGG ATTTGTGGGG CAAAGTGTCA GCCAATATTG ACCAAGCCCA ATGGGCGGCG
CTGGCGAGCG CCGAAGATAG GGAAAGCACC ACCCAAAGCC TAGTGGCGAC CACAGCATCC
TTGTACTGGC AGATAGGTTA TTTAAATCAA CGGGTTGATT TAAGCCAAAA GAGTATAGCG
TACAGCAAGC AAACGCTGGC ATTAACCCAA AGGCAGTATG ATTCTGGCGC CGTGACGCAA
GTGAATGTGC TCGAAGCTCA GCGCAGCATG GCGGGACAAG AGGCGGCCCA TAGCCAGCTT
ATTCAGCAAT TAACTGTGGC TAAAAATGCC CTCGCGATAT TACTGAATCA GGCGCCTGCT
GCTGACTCAG CGCAGAGTTT AGCCTCAGGG GAGACTTGGG TTGAGATTAA GCAACTCCCC
GACGTGGCAG TGCCGGACGT TAGCGTGGGC GTACCCGCAG ATTTGTTAGT CAGACGCCCA
GATGTGAAGG CTTCCTTGTA TCAACTGCGC TCCGCCTTGG CGAGTAAAGA CGCGACCTAT
GCGAGTTATT TCCCAAGCCT GAGTTTAACG GGTGGTATTG GAGAGTCGAC CTCAGAGTTA
AAAGAGCTGT TACGCAATCC TGTTGGTAGC TTAGGCGCGG GGCTTGTCTT GCCCTTTTTG
CAGTGGAATC AAATGCAAAT CAATAACGAC ATTGCCGATA TTGATTATCA AACCGCTGTG
GTGAATTATC GCAAGACGCT CTATTCCGCC TTTGAAGATG TCGATAACGC GATTTCGGCA
AAGCAACAAT ATCGCTATCA AGGGGAGAAG TTGGAGCAGC AATTCAGTGC GGCGGCAGCC
GTTGAAGCCA TTTATGAGAG TCAGTACCGC AATGGCGCTA TCGGTATTCA GAATTGGATT
GATGCCCAAG AGAATCGTCG CAGCGCCGAG GCGGCTTTGC TCGAGAATCG TTACAATCAA
CTCACCGCCC AAGCGACGCT TTATCAAGCC CTTGGCGGCA GCGATATCGC CCCGCCTTTG
GCAAAGGAAT AA
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| Protein sequence | MNTKIFHRPF SPRSCAIAVG MALGITLLSG CGSFMRSDFE PPALAIPEQW QNTTVNEQVK
VDPWWQQFHQ PELDKLVSQV LSTNNDLTLA TLTLRKARLQ AGLTRDDLYP QLSANLGTSH
NQPLDGGDAT KSYQANLSVS YEVDLWGKVS ANIDQAQWAA LASAEDREST TQSLVATTAS
LYWQIGYLNQ RVDLSQKSIA YSKQTLALTQ RQYDSGAVTQ VNVLEAQRSM AGQEAAHSQL
IQQLTVAKNA LAILLNQAPA ADSAQSLASG ETWVEIKQLP DVAVPDVSVG VPADLLVRRP
DVKASLYQLR SALASKDATY ASYFPSLSLT GGIGESTSEL KELLRNPVGS LGAGLVLPFL
QWNQMQINND IADIDYQTAV VNYRKTLYSA FEDVDNAISA KQQYRYQGEK LEQQFSAAAA
VEAIYESQYR NGAIGIQNWI DAQENRRSAE AALLENRYNQ LTAQATLYQA LGGSDIAPPL
AKE
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