| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0833 |
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| Symbol | |
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| ID | 5752551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 975642 |
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| End bp | 977645 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641287096 |
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| Product | ABC transporter related |
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| Protein accession | YP_001553271 |
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| Protein GI | 160873955 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.337791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAACGG CATTACTTGA AATTTCAGGT TGTTATCGCA CTTTTCAGGC GGGTGAGCAG
CAACTTACTG TGCTGAAAGA TGTGAACCTG TCGATTGGCC GTGGCGAGAT GGTGGCGATA
GTGGGCGCCT CTGGCTCGGG TAAATCGACC CTAATGAACA TTCTTGGTTG TTTAGATAAG
CCGTCAGAGG GCGCGTATTT TATCAATGGC CAAGATACCT CAACGATGGA CGTGGATGAG
TTAGCGCAGC TGCGCCGCGA GCACTTTGGC TTTATCTTTC AGCGTTATCA TTTACTGGGC
GATTTAACCG CCATAGGCAA CGTCGAAGTG CCTGCTGTGT ATGCGGGTAA AGAGCGCACG
GTGCGTAAAG ACAGAGCCGA GCATTTGTTG ACGCGTTTAG GCCTTGGCGA CAGGCTCGAC
CATAAACCCA ATCAGCTCAG TGGTGGTCAA CAGCAGCGGG TCAGTGTGGC GCGCGCCTTG
ATGAATGGCG GCGATGTGAT CCTTGCCGAT GAGCCGACTG GTGCGCTGGA TAGTCACAGT
GGTGAAGAAA TGATGCAGCT GTTGCAGGAG CTGCACCGCG ACGGTCATAC CATCATTATC
GTGACCCACG ATATGCACGT GGCCCAATAT GCCGACCGCA TTATCGAAAT CAAAGACGGC
GTGATCATCA GCGATGAGCG CAGTCAGGAT AAACAGACTG CTAAGCCGCA AAGCTCAACG
TTACAAAATA CGGCGTCACA AAAGCCTAAC GGCGCAGTAC TAGCAAAAGA CAGCTCGCGT
GCGCGGGTGG CTTCGTGGGA CAGATATGTC GAGGCGCTTA AAATGGCGCT GGTGGCGATG
TCGACCCACA GGTTACGTAC CTTCTTGACT ATGCTCGGGA TTATTATAGG TATCGCCTCA
GTAGTTTCTG TGGTGGCCTT AGGTGAAGGC TCGCAGCAGG CCATTCTCAA AAGTATCAGT
TCGATGGGAA CCAACACGAT TGATATTCGC CCGGGTTCAG GTTTTGGCGA TCGACGCTCG
GCGCGGGTGC GTACCTTAAC GGCGACCGAT GCCAATGCCC TTAAAAATCT GCCCTATGTC
GATAGCGTGA CCCCTAGTAT TGGCTCTAGC GCGACGGTAC GTTTTGGTAA TAAAGCGGTA
TCGGCCTCGG TGAATGGGGT GGGGCCGGAG TTCTTTCGCG TGAGAGGTTA CGAGTTAGCA
CAGGGGCAGT TTTGGGATGA TGCCAGCGTT GCAACACTCG CCCAAGATGC GGTGATTGAT
GACAACACCC GTAAGGAGCT CTTTCCTAGC AGTGCTGGCG ATAATAACTC GGCCATCGGC
CAAGTGATTT TCCTCGGGGA TTTACCCGTG CGCATCATAG GTGTGACGAA GCCAAAAGAA
AGTGCCTTTG GTAACAGCGA TGCGCTCAAT GTGTGGGTGC CTTACACCAC AGTTTCTGGC
CGTATGATAG GTAAAAACTA TTTGGATGGC ATCACAGTAC GACTCGATGA AACTGTGCCG
AGTAATGCGG CGGAGCAGGG CATTATCGCG CTACTTAAAA TGCGCCACGG CACTCAAGAT
TTCTTCACCA TCAATACCGA TACCATTAGG CAGAACATCG AGAAAACCAC AGCAACCATG
ACCTTACTGA TCTCGGCAAT CGCGGTGATT TCCCTTGTCG TTGGCGGAAT TGGGGTGATG
AATATTATGT TAGTGTCTGT GACTGAGCGG ACCCGTGAAA TCGGGGTTCG TATGGCAGTG
GGCGCGCGTC AGAGTGATAT TTTGCGCCAG TTCCTTATCG AAGCCATCTT AGTGTGTTTG
TGTGGCGGAA CCTTAGGCAT TGCTTTGTCC TACTTAATTG GCGTGGTGTT TGCGCAAACG
GGAGGCAGTT TCCAAATGAT TTATTCCACC ACATCCATCG TTGCCGCCTT TGCCTGTTCG
ACCTTAATTG GTGTGCTATT TGGTTTCTTG CCCGCCCGCA ATGCGGCGCA GTTAGATCCC
GTTGATGCAC TAGCCAGAGA GTAA
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| Protein sequence | MTTALLEISG CYRTFQAGEQ QLTVLKDVNL SIGRGEMVAI VGASGSGKST LMNILGCLDK
PSEGAYFING QDTSTMDVDE LAQLRREHFG FIFQRYHLLG DLTAIGNVEV PAVYAGKERT
VRKDRAEHLL TRLGLGDRLD HKPNQLSGGQ QQRVSVARAL MNGGDVILAD EPTGALDSHS
GEEMMQLLQE LHRDGHTIII VTHDMHVAQY ADRIIEIKDG VIISDERSQD KQTAKPQSST
LQNTASQKPN GAVLAKDSSR ARVASWDRYV EALKMALVAM STHRLRTFLT MLGIIIGIAS
VVSVVALGEG SQQAILKSIS SMGTNTIDIR PGSGFGDRRS ARVRTLTATD ANALKNLPYV
DSVTPSIGSS ATVRFGNKAV SASVNGVGPE FFRVRGYELA QGQFWDDASV ATLAQDAVID
DNTRKELFPS SAGDNNSAIG QVIFLGDLPV RIIGVTKPKE SAFGNSDALN VWVPYTTVSG
RMIGKNYLDG ITVRLDETVP SNAAEQGIIA LLKMRHGTQD FFTINTDTIR QNIEKTTATM
TLLISAIAVI SLVVGGIGVM NIMLVSVTER TREIGVRMAV GARQSDILRQ FLIEAILVCL
CGGTLGIALS YLIGVVFAQT GGSFQMIYST TSIVAAFACS TLIGVLFGFL PARNAAQLDP
VDALARE
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