Gene Sbal195_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0780 
Symbol 
ID5752497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp921578 
End bp922111 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content49% 
IMG OID641287042 
Productglycoside hydrolase family protein 
Protein accessionYP_001553218 
Protein GI160873902 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00423151 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCATTAA AGCAAAAGCT CGTGGCACTG GGGCTTTCTT CTGCTGTCGC GCTGGCTGGG 
GCTAATTTGA TAGCTCCCAC CGAAGCGCCG AATGGCGAGC CCGTTCTGCA CACCTATCTT
GATCCGGTGG AAGTTATCAC TGCCTGCTTT GGCCACACTG ACCCCGAGCT TGAGATCAAC
CAGTTTTTTA GCGAGCAGCA ATGCATTGAA ATGTTCGCCA AGGATTTAGG TAAAGCCGAT
CGGCAGCTGC GGCGGCTAAC GTATCCGGTG CAACTTACTG AAGGTGAACA CGCTGCTTAT
CTCAGTCTGA TTTATAACTT TGGTGCGGGT AATTTTCAAA CCTCCACTTT GCGCAAATTG
TTACTCCGCG GCGAACGGGT GGCAGCGTGC CACCAACTCA CCGAAGCCTG CGGAAAAAAG
GGCTGTAATG GGTTTGTCTA TGCGCGTGAC ATCAAGTTAC CTGGCTTAGT CGAACGCCGC
AAAAAAGAAC GTAAAATCTG CTTAAAGGAT TTATATGTGG AACAAAATCA TTAA
 
Protein sequence
MSLKQKLVAL GLSSAVALAG ANLIAPTEAP NGEPVLHTYL DPVEVITACF GHTDPELEIN 
QFFSEQQCIE MFAKDLGKAD RQLRRLTYPV QLTEGEHAAY LSLIYNFGAG NFQTSTLRKL
LLRGERVAAC HQLTEACGKK GCNGFVYARD IKLPGLVERR KKERKICLKD LYVEQNH