Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0780 |
Symbol | |
ID | 5752497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 921578 |
End bp | 922111 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641287042 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001553218 |
Protein GI | 160873902 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00423151 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCATTAA AGCAAAAGCT CGTGGCACTG GGGCTTTCTT CTGCTGTCGC GCTGGCTGGG GCTAATTTGA TAGCTCCCAC CGAAGCGCCG AATGGCGAGC CCGTTCTGCA CACCTATCTT GATCCGGTGG AAGTTATCAC TGCCTGCTTT GGCCACACTG ACCCCGAGCT TGAGATCAAC CAGTTTTTTA GCGAGCAGCA ATGCATTGAA ATGTTCGCCA AGGATTTAGG TAAAGCCGAT CGGCAGCTGC GGCGGCTAAC GTATCCGGTG CAACTTACTG AAGGTGAACA CGCTGCTTAT CTCAGTCTGA TTTATAACTT TGGTGCGGGT AATTTTCAAA CCTCCACTTT GCGCAAATTG TTACTCCGCG GCGAACGGGT GGCAGCGTGC CACCAACTCA CCGAAGCCTG CGGAAAAAAG GGCTGTAATG GGTTTGTCTA TGCGCGTGAC ATCAAGTTAC CTGGCTTAGT CGAACGCCGC AAAAAAGAAC GTAAAATCTG CTTAAAGGAT TTATATGTGG AACAAAATCA TTAA
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Protein sequence | MSLKQKLVAL GLSSAVALAG ANLIAPTEAP NGEPVLHTYL DPVEVITACF GHTDPELEIN QFFSEQQCIE MFAKDLGKAD RQLRRLTYPV QLTEGEHAAY LSLIYNFGAG NFQTSTLRKL LLRGERVAAC HQLTEACGKK GCNGFVYARD IKLPGLVERR KKERKICLKD LYVEQNH
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