Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0747 |
Symbol | alr |
ID | 5752464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 896888 |
End bp | 897964 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641287009 |
Product | alanine racemase |
Protein accession | YP_001553185 |
Protein GI | 160873869 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00105431 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000194512 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAACCCTT TTCCCCGTGC AGAAATTAGC AGTAGTGCAC TGCAAACCAA TCTCGCTGCG TTGCGTCAAC AGGCACCAGC GAGTCGCGTA ATGGCCGTCG TTAAAGCGAA CGGCTATGGT CATGGATTAT TGAATGTCGC TAATTGTTTA GTCAGTGCCG ATGGCTTTGG TTTAGCACGA TTGGATGAAG CCTTAGAATT ACGAGCGGGC GGCGTGACAG CGCGGTTGTT ATTGCTGGAA GGTTTTTTCC GCGCCACCGA TCTCCCGTTA CTCGTCGGGC ATGATATCGA CACTGTGGTG CATCATAGCT CTCAGCTTGA GATGTTAGAG CAAACTGTGC TGTCTAAACC TGTGACTGTT TGGCTGAAAG TGGATTCAGG TATGCATCGC TTAGGCTTTA CGCCCGAGCA ATTCTCAACG GTTTACGATC GATTAATGGC CTGTTCCAAT GTGGCAAAAC CGATTCATTT GATGACGCAT TTTGCCTGTG CAGATGAGCC AGATAACACT TATACCTCAG TACAGATGGC GGCTTTTAAT ACCTTAACAG CTGGCTTACC CGGATTTAGA ACCTTAGCCA ACTCCGCCGG TGCCTTGTAT TGGCCGCAAA GCCAAGGCGA TTGGATCCGT CCGGGAATCG CACTCTATGG TGTGTCACCT GTCACTGGAG ATTGCGGTGC GAATCACGGA CTAGTACCTG CGATGGAACT GGTATCACAG TTGATTGCGG TGCGGGATCA TAAAGCCAAT CAGCCAGTGG GTTATGGTTG TTTCTGGACC GCGAAGCAAG ATACCCGTTT AGGTGTTGTC GCAATTGGAT ATGGTGATGG TTATCCCCGT AATGCACCGG AAGGTACACC TGTGTGGGTT AATGGTCGTC GCGTACCCAT AGTTGGCCGC GTCTCTATGG ACATGTTGAC TGTCGACCTA GGCCAAGATG CGCAGGATAA GGTTGGCGAT AGCGCTTTGT TGTGGGGTAA AGCATTACCC GTAGAAGAAG TCGCTGAGCA TATTGGTACT ATCGCTTATG AATTAGTCAC TAAGCTCACC CCAAGGGTTG CGGTTTGTTT AGCTTAG
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Protein sequence | MNPFPRAEIS SSALQTNLAA LRQQAPASRV MAVVKANGYG HGLLNVANCL VSADGFGLAR LDEALELRAG GVTARLLLLE GFFRATDLPL LVGHDIDTVV HHSSQLEMLE QTVLSKPVTV WLKVDSGMHR LGFTPEQFST VYDRLMACSN VAKPIHLMTH FACADEPDNT YTSVQMAAFN TLTAGLPGFR TLANSAGALY WPQSQGDWIR PGIALYGVSP VTGDCGANHG LVPAMELVSQ LIAVRDHKAN QPVGYGCFWT AKQDTRLGVV AIGYGDGYPR NAPEGTPVWV NGRRVPIVGR VSMDMLTVDL GQDAQDKVGD SALLWGKALP VEEVAEHIGT IAYELVTKLT PRVAVCLA
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