Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0720 |
Symbol | |
ID | 5752437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 870768 |
End bp | 871319 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641286982 |
Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
Protein accession | YP_001553158 |
Protein GI | 160873842 |
COG category | [R] General function prediction only |
COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.271067 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACAGC AAGGATTTTA CGGCCCAATC AGTGATGATG TGTGGCAACG CGCGCAAAAG ATTAAACTGT TGATCTGTGA CGTCGATGGA GTGTTTTCCG ACGGTCGTAT TTACCTAAGC AATAGCGGCG AAGAGCTAAA AGCCTTCCAC ACCCGCGACG GCTATGGCGT GCGCTCGATA CTCACCAGCG GTTTTAATCT TGCGGTGATT ACTGGACGTC AATCCAAAAT CGTTGAAAAC CGTATGACGG CGCTTGGTGT CACCCATATT TACCAAGGCG TAGATAATAA GTTCGAGCCC TATGAAGCAT TGCTCGCACT CTATGGCGTT ACCCCAGAAG AAGTGGCTTA TATCGGTGAT GATATTGTCG ATCTGCCAGT GATGAATGTC GTCGGTTTAG CAGTCAGCGT TGCCGATGGT CATCCCTATG TTCGTCAGCA CGCCCACTTT GTGACTACGC TCAATGGCGG CCACGGTGCC TTGCGTGAAC TCACAGATCT ATTGCTACTC AGTCAAAATA AATTCACTTC GGCCCATGGA ATGAGTATAT GA
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Protein sequence | MPQQGFYGPI SDDVWQRAQK IKLLICDVDG VFSDGRIYLS NSGEELKAFH TRDGYGVRSI LTSGFNLAVI TGRQSKIVEN RMTALGVTHI YQGVDNKFEP YEALLALYGV TPEEVAYIGD DIVDLPVMNV VGLAVSVADG HPYVRQHAHF VTTLNGGHGA LRELTDLLLL SQNKFTSAHG MSI
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