| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0674 |
|---|
| Symbol | |
|---|
| ID | 5752391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 821436 |
|---|
| End bp | 822611 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641286936 |
|---|
| Product | HEAT repeat-containing PBS lyase |
|---|
| Protein accession | YP_001553112 |
|---|
| Protein GI | 160873796 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTT CAAAAGCAAT TATTCTGCCG CTGTTCTGTG TGTTTGTAGT GCCAGTATTA
TCGGTTTGGT CTGCGCAGGA TGCAGCATGT TCTACACCGG AGGTTTGTTC GATAAAAGTA
CAGCTGCAAA AAAAACCTGA TTATCTACTT CTCAGAGATC TGGCTGAAAA AGGCCCGATG
GGACGTGAAG CTGGTTCTGT CGTCGCGGCA TTATTGGACC ATCCTGATTG GGCTATCAGA
GAGAAGGCAG CCAGAGCACT TGGATTTATT GACTATCCAG AGGCAATTCC CTATTTGGGC
AAGTTGCTTA ATGATCCAGC CAATGCTGTA TTAAGTTTGA TAGCCGCTGA ATCGCTTGGT
CGAATCGGAG ACCAGCGTGC AATAGACTTT CTTGAGCCAG TTGCAGAATC GCATTGGTTC
CCTGCAGTTC GAAATGCTGC GAAAACAGCG ATATTCAACA TTGAGCATAA TCGTCAGTAC
CCGAAGCAGC ACCCGAATGC CAGTTTCGCT GATGTCTTTT TTGATTATTT GATGGTCGAA
AATTACAGTA CTCCAAGGCC CAAGTTATGT AGCGAATTGG CAGTTCCCTT TGCGAAGAAT
AATTTGTTCA TAAAACGCTA TCAAGATACT GAAAACAGTT CTCTGGCAGC TATTTCATAT
AGGGTTATCA GTCGTGGCTC CAATTCTTTG GAACAGACAA ACCCGGACGC TATAGAGCGT
TATACGATAG TTTTGGATGC TTCAAATCAG CTGACCCTGC CAGGAGTTCG ATACCCACAA
GAGCCAAATG TGGCATTAAA AGTCGGTGGC GGATGGTTGG CAGGCCTTAA TCTTGGTGAG
TGGGGCGGAG AACTGGTTTT TCTTTCAGAC TTGGGGACAT CTTCGCGCAT CTTATCAGAG
CCAATCGCGG ACATTTTTCA ATTGGGTAGC AGGAATATTG CCATTACCGA TAGAATCGAC
GGGTTTGACA TCATCTACGA AATAAAGCGC TCTGGCGACA ACCAATGGTC GGCAACACCA
TGGCGGCGAT TACCCGATTC TATGTTTGAA GCCAAAATAC TTGCAAGCGG TGAGCTAATG
GTAAATACGA ACGTCGGAAG CCTGCAAATT TCAAGTGATG GCCAGATGCG AATGGCGTCT
TGTAAGGCAT ATTACCCAAT CAATGAAGAT AAATAA
|
|---|
| Protein sequence | MEISKAIILP LFCVFVVPVL SVWSAQDAAC STPEVCSIKV QLQKKPDYLL LRDLAEKGPM
GREAGSVVAA LLDHPDWAIR EKAARALGFI DYPEAIPYLG KLLNDPANAV LSLIAAESLG
RIGDQRAIDF LEPVAESHWF PAVRNAAKTA IFNIEHNRQY PKQHPNASFA DVFFDYLMVE
NYSTPRPKLC SELAVPFAKN NLFIKRYQDT ENSSLAAISY RVISRGSNSL EQTNPDAIER
YTIVLDASNQ LTLPGVRYPQ EPNVALKVGG GWLAGLNLGE WGGELVFLSD LGTSSRILSE
PIADIFQLGS RNIAITDRID GFDIIYEIKR SGDNQWSATP WRRLPDSMFE AKILASGELM
VNTNVGSLQI SSDGQMRMAS CKAYYPINED K
|
|---|
| |