| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0669 |
|---|
| Symbol | |
|---|
| ID | 5752386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 816003 |
|---|
| End bp | 816992 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641286931 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001553107 |
|---|
| Protein GI | 160873791 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAG AGGACTTAGC GTTATTCCAC CGAATTGCTG AAACCGGTAG TTTGATTGAA
GCGGCGGATT TACTTAACTT GCCAAAATCG ACTGTCAGTC GGCGTTTACA AGCTTTGGAA
GATGAGCTGA ACATTAAATT GTTCCACCGT CAGAGCCGCT CTATGACGCT CACTTCTGCG
GGCAGTCATT TTTACCAGCG CTCGCAGAAT ATTTTGGCTC AGCTCGACGA AACCCTATTC
GAAATGACCA ATGACGATGC TGAGATCAGC GGGCATTTGC GCATTCAAAT GTTCCCCATC
CACAGCATGA AAATCTTGAT GCAGGCCATT TTCCGCTTTA TGGATATGCA CCCTAAACTC
ACCTTAGAAG TCATCAGCAG TTCAGAATCC GTTGATATGG TGAAACATAA TCTCGATGTG
GCTTTTGTGG TCGAGCCTGC GTTGGATACC TTAGATTTAG TAGTGCGGCC GATTTTTACT
ACTGACTTAC GTTTTTACGC GAGTCCGCAA TATTTAGCGG CACACGGTAC ACCTAAAACA
CCGAAAGAGA TTGAAGCACA TAATGTGTCT ATGTTCCGTT TATCCAACGG CAAAATCTTT
AATGAGTTAT TTATCGGTTC AGAACAAGAG GTGAGAGTCA GAGGTAATTT CTGCTCCAAC
AGTATTGAAG TGGCGGTTGA GTTTGGATTG CAAGGACGCG GTATCGTGTA TGCACCTTCT
GAAGTCGTTG CCGAATATGT GGAAACTGGT GAGTTAGTGA CCTTATTACC TGAAATCCAA
CCCCACCAAG GTGAGTGCTT CTTAGCTTAT CCATCAAGAC GTTACGTAAG TTTAGCCAGT
CGGCGCTTTA TCGACTATAT CATGCAAGAG TTAGTGCCAA ACGGGGTGCC GACTAATATG
AGTGAGCAAG GCCCACGTCG ATCCTGCAAA GCCTCTACGG GAGCGTTTTC AGACGACGTG
TTGCGCTTTC CCGTTAAAAA ATCAAGCTAG
|
|---|
| Protein sequence | MKTEDLALFH RIAETGSLIE AADLLNLPKS TVSRRLQALE DELNIKLFHR QSRSMTLTSA
GSHFYQRSQN ILAQLDETLF EMTNDDAEIS GHLRIQMFPI HSMKILMQAI FRFMDMHPKL
TLEVISSSES VDMVKHNLDV AFVVEPALDT LDLVVRPIFT TDLRFYASPQ YLAAHGTPKT
PKEIEAHNVS MFRLSNGKIF NELFIGSEQE VRVRGNFCSN SIEVAVEFGL QGRGIVYAPS
EVVAEYVETG ELVTLLPEIQ PHQGECFLAY PSRRYVSLAS RRFIDYIMQE LVPNGVPTNM
SEQGPRRSCK ASTGAFSDDV LRFPVKKSS
|
|---|
| |