| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0654 |
|---|
| Symbol | |
|---|
| ID | 5752371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 791191 |
|---|
| End bp | 792423 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641286916 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001553092 |
|---|
| Protein GI | 160873776 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACAC GAACGCTGTT TACACAAACG CTGTTTATAC AAAGAGTGAC TGAACGAGCA
CGCAGTGCAT GCGATATTTC ATTTAAAAGC CCCCATCATC TCCCAAAGGC GCCCTTATTC
GCGCCTTTGA CGTTTCTACT GGCGAGTCTT TTCACCTTAA CCCCTATAGC CGTATCTGCG
GCGGACAAGG TCGACGTTAT CCCTGTGACG GTCGAGGCCA TTAAAGAAAC CTCCTTTGCC
GATGTCGTCA ATGAAGTCGG TAAAATTAAC GCCATCGATT CGGCGATACT CAACTTTAAC
GCCAGCGAAA AAATCAGTGC CATTCATTTT AGTAACGGCG ACAAAGTGAC GAAAGGCCAA
GTGATTGCCG AGCAAGATAA CACTAAGGCC AAGGCCGATT TAGACAAGGC TAAGAGCACC
TTAGCACTGG CGAAAACTAA GCTTGAGCGT ATTGAAGACC TGCTGATCAA AGAGCCTTTC
GCACTCGCCA AGCAAGATGT GGATGAGCTG CGGGAAAATG TGAATCTGGC CGATGCCGAT
TTTCGCCAGA AACAAGCGAC CATGAACGAC TACTTGATCA AGGCGCCCTT CGACGGTCAG
CTAACAAGCT TTAGTCAGTC CATCGGTAGC CAAATTGGCG CAGGTACAGC CTTAGTCACT
CTCTATAGTT TAAATCCCGT CGAAGTCCGT TATGCCATTA GCCAGAACGA TTTTGGTAAG
GGGCAAAAAG GCCAGAAGGT GAATGTGACG GTCGAAGCCT ATGGCAATAA GGTGTTCAAA
GGATTAGTTA ACTATGTGGC TCCAGCGGTG GATGAAAGCT CAGGACGAGT TGAAGTGCAC
GCCGCCCTCG ACAACCCAGA GTTCAAACTA GCGCCCGGCA TGTTCGCCAA TATTAAGCAG
TTCTATAGCC GTGGGATTAA ACGCTTATTA GTGCCGCAAA ATTCGATTAT CGCCAATAAT
GACGAACGCT TTGTCTGGTT AGTGCGTGGC GATAGCGCCG TAAAACAAGT GGTTAAACTC
GCGCAAAACA CTAATGACGG TTATGCGGTC GTGACCGAAG GTTTAGCCGA AGGCGATCTC
GTGGTTAAGA CGGGCATGCA AAACCTCAAG TCCGATAGCA AGATCAAAGT CATTCAGGAC
AAAAACACGT CAGATAAAGC GGCCGCCTCC AGTTCCAACT CAGGTGCGGG TGCTACTCCA
AGTCCTGAAC CTAGCACTGA GGGGGCCGAA TAA
|
|---|
| Protein sequence | MFTRTLFTQT LFIQRVTERA RSACDISFKS PHHLPKAPLF APLTFLLASL FTLTPIAVSA
ADKVDVIPVT VEAIKETSFA DVVNEVGKIN AIDSAILNFN ASEKISAIHF SNGDKVTKGQ
VIAEQDNTKA KADLDKAKST LALAKTKLER IEDLLIKEPF ALAKQDVDEL RENVNLADAD
FRQKQATMND YLIKAPFDGQ LTSFSQSIGS QIGAGTALVT LYSLNPVEVR YAISQNDFGK
GQKGQKVNVT VEAYGNKVFK GLVNYVAPAV DESSGRVEVH AALDNPEFKL APGMFANIKQ
FYSRGIKRLL VPQNSIIANN DERFVWLVRG DSAVKQVVKL AQNTNDGYAV VTEGLAEGDL
VVKTGMQNLK SDSKIKVIQD KNTSDKAAAS SSNSGAGATP SPEPSTEGAE
|
|---|
| |