| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0645 |
|---|
| Symbol | aspA |
|---|
| ID | 5752362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 774233 |
|---|
| End bp | 775672 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641286907 |
|---|
| Product | aspartate ammonia-lyase |
|---|
| Protein accession | YP_001553083 |
|---|
| Protein GI | 160873767 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1027] Aspartate ammonia-lyase |
|---|
| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATA CTAATAGCGT ACGGATCGAA GAAGATTTAT TGGGAACGAA AGAAGTGTCC
AATGAATTTT ATTACGGCAT ACATACATTA CGTGCCATCG AAAACTTTAA GCTGAGTAAT
CAAAAAATTT CCGATGTACC TGAATTAGTC CGTGGCATGA TGCTAACAAA GAAAGCTGCT
GCCATGGCCA ATAGCGAATT AGGCGCCGTA AGTCCTGAAA TCGCTGACAA GATTATTGAA
GCGTGCGATT TGATACTCAC AACAGGCCGA TTTGTGGATC AATTCCCAGT CGACGTGTAT
CAAGGAGGCG CAGGCACTTC AGTCAACATG AATACCAATG AGGTATTAGC CAACGTTGCA
CTGGAGATCA TGGGGCTTGA AAAAGGCCGT TACGATGTCA TCAATCCTAA TGACCATGTC
AACAAGTGCC AATCGACCAA CGATGCCTAT CCAACAGGCT TCCGTATTGC GGTCATCAAC
AGTACCGATA TTCTGTTAGA TGCATTAACT GACCTTATCA GTGCCTTCGA CACTAAAGCC
GCAGAGTTTA AAACCGTCTT AAAAATGGGC CGCACTCAGT TGCAAGATGC CGTGCCTATG
ACCTTAGGCC AAGAGTTTCA TGCCTTTGCT GTCACACTGC GAGAAGAAAT TAAGTCCATC
AAGCGTTGCC AAGAGTTGTT GTTAGAAGTG AACTTAGGCG CAACGGCCAT TGGTACAGGC
CTTAACACGC CAGTGGGTTA TTCCTCACTC GCCATTAAAC ATCTGGCTGA AATCACTGGC
CGCGCTTATG TGCCAGCGGA AGATTTAATC GAAGCTACCT CCGATTGTGG CGCCTACGTC
ATGCTGCACA GTGCGATTAA GCGCATGGCG ATTAAAATGT CCAAGATTTG TAATGACCTA
CGCTTACTGT CCTCGGGTCC ACGTACAGGT CTGAAGGAGA TCAATCTGCC TGAATTACAA
GCAGGTTCTT CTATCATGCC AGCTAAGGTT AACCCTGTGA TCCCTGAGGT CGTCAATCAG
GTTGCCTTTA AGATTGTCGG CAACGATATC ACTATCACTA TGGCCGCCGA AGCGGGCCAG
TTACAGCTTA ACGTCATGGA ACCTGTGATT GGTCAGGCGA TGTTTGAGTC ACTCAGTTTA
ATGGGTAATG CCTGTATCTC CCTACGTGAG AAATGCGTTG AAGGTATCAC TGCAAACCCA
GAGATCTGTA TGGCCCATGT GATGAACTCC ATCGGGATCG TGACCTACCT TAACCCCATC
ATCGGCCACC ATGAAGGTGA CATCATCGGC AAGATTTGCG CCCAAACGGG TAAAAATGTC
CGTGAAGTGG TACTCGAACG CGGTTTGTTA ACGGTTGAAG AACTCGATGA CATTCTCTCG
ATTGAAAACC TGATGAATCC TAAGTACCAA GCTAAACGCA GTAGCAAAGC CAAAGTGTAA
|
|---|
| Protein sequence | MKDTNSVRIE EDLLGTKEVS NEFYYGIHTL RAIENFKLSN QKISDVPELV RGMMLTKKAA
AMANSELGAV SPEIADKIIE ACDLILTTGR FVDQFPVDVY QGGAGTSVNM NTNEVLANVA
LEIMGLEKGR YDVINPNDHV NKCQSTNDAY PTGFRIAVIN STDILLDALT DLISAFDTKA
AEFKTVLKMG RTQLQDAVPM TLGQEFHAFA VTLREEIKSI KRCQELLLEV NLGATAIGTG
LNTPVGYSSL AIKHLAEITG RAYVPAEDLI EATSDCGAYV MLHSAIKRMA IKMSKICNDL
RLLSSGPRTG LKEINLPELQ AGSSIMPAKV NPVIPEVVNQ VAFKIVGNDI TITMAAEAGQ
LQLNVMEPVI GQAMFESLSL MGNACISLRE KCVEGITANP EICMAHVMNS IGIVTYLNPI
IGHHEGDIIG KICAQTGKNV REVVLERGLL TVEELDDILS IENLMNPKYQ AKRSSKAKV
|
|---|
| |