Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0582 |
Symbol | |
ID | 5752299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 676559 |
End bp | 677881 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641286844 |
Product | integrase family protein |
Protein accession | YP_001553020 |
Protein GI | 160873704 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.790715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0110983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTTG TCGATTATAT TTTTTCAGAG GGTGAGCGTC GGTCACTATT AGTGAGTGAA GATAGTCGCA TTGATTTTTG GTCAACTCTT TATGTCACTG CTGAGCTTAG ACAAGACCAC AAGCAAACCT CAATAAAGAA AGAGCTATAT AGCATCAAGC TGCTGAGAAA GTGGGAACAG TTGCATACTC GAGATTTATT GGCTGAGATT CGACAGCTAA ATTTTCCGTC TAGGGAAACA ATAAAATCTA TCAAACACTT CTGTGGTATA TCTTCAAAGG CTGAAAATTC AAAATCTGCT AAGGTGGTGA GTTTCACAAA ATTAGCCAAA ACGCATTCTG CACTTGATGC TGTCGATAAA AACTATCAGT ACCAGCGTAT GATTGGCATC AATAAGTTCT TGGGATTTTG TGCTTGGGAA TTGTGTAAAT TCAAACCAAA TGCGGCTGAA CTAAGAAGAG AAATCGAGGC AATGTCCGCG CAGTTTAAGG CCCATTACCC TAAGGGATTA AGCAACTTAT CTAAAGCAAC ACACGCAGAA GCAGATGACT TTAAAGCCTT CTTGGAAGTC GCGCATCCCA ATCATCCGCA AAACCCCTTC TCAAATTTCG AGATAAAATT GAGAAACTAT CTACTAATCC AAATTTTGTA CTGGACAGGA TGTCGACCAT CAGAAGTGTT GTCTCTCACA TTAGATGATA TTGGGCACGA TATAGATCAG CCTACTTTAC GGTTTATTAG GCGTCATGAT GACATCAATG ATCCTCGTAA AGTTCAGCCT ACCTTGAAAA CACAGGAGCG TGAAATAAAC ATCCCTCCAG CTCTATACAC CGATCTCGAA TATTACATCA GAGCGATTAG GCCAATATTT AGCCGTTCCA AATCACACCC ATATATTTTT GTCCATCACA AAGGTGGAAT GAAAGGCTCG GCGATGACAG ACAAAGCTTT TTCTGAAGCA GTAATACCCA AGCTTAAAGC AGTAGATAAG ATGTTTATCA ACATTCAGCG TAGAGGATTT CGCATTTATT TCAATGAAAG GTTGTCAGCT CAAGTTGATA TGCATAATGA GGGTATTAGC GAGCAGATTC TCGTTGCCGA GAAGCAAGGT TTGTATGAAA AGGTAAAAGT GCTCAAGTCA GAGCTGATTA AAGACGGCGA TGAAATTAAT ATGCGGATGA TGTTAAATGG TCATAGCAGT CCTGACAGCG CAAGGCCCTA TTTAAATAGA TTTGCAGAAC GTAAAGCTAG AGATATACAT AAGCGCATGA TGTTGGACAT TAGTTCAGCA ACAAAGGAAA TAAAAAATGG TAGAAGCAGT TAG
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Protein sequence | MKVVDYIFSE GERRSLLVSE DSRIDFWSTL YVTAELRQDH KQTSIKKELY SIKLLRKWEQ LHTRDLLAEI RQLNFPSRET IKSIKHFCGI SSKAENSKSA KVVSFTKLAK THSALDAVDK NYQYQRMIGI NKFLGFCAWE LCKFKPNAAE LRREIEAMSA QFKAHYPKGL SNLSKATHAE ADDFKAFLEV AHPNHPQNPF SNFEIKLRNY LLIQILYWTG CRPSEVLSLT LDDIGHDIDQ PTLRFIRRHD DINDPRKVQP TLKTQEREIN IPPALYTDLE YYIRAIRPIF SRSKSHPYIF VHHKGGMKGS AMTDKAFSEA VIPKLKAVDK MFINIQRRGF RIYFNERLSA QVDMHNEGIS EQILVAEKQG LYEKVKVLKS ELIKDGDEIN MRMMLNGHSS PDSARPYLNR FAERKARDIH KRMMLDISSA TKEIKNGRSS
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