Gene Sbal195_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0582 
Symbol 
ID5752299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp676559 
End bp677881 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content40% 
IMG OID641286844 
Productintegrase family protein 
Protein accessionYP_001553020 
Protein GI160873704 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.790715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0110983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTG TCGATTATAT TTTTTCAGAG GGTGAGCGTC GGTCACTATT AGTGAGTGAA 
GATAGTCGCA TTGATTTTTG GTCAACTCTT TATGTCACTG CTGAGCTTAG ACAAGACCAC
AAGCAAACCT CAATAAAGAA AGAGCTATAT AGCATCAAGC TGCTGAGAAA GTGGGAACAG
TTGCATACTC GAGATTTATT GGCTGAGATT CGACAGCTAA ATTTTCCGTC TAGGGAAACA
ATAAAATCTA TCAAACACTT CTGTGGTATA TCTTCAAAGG CTGAAAATTC AAAATCTGCT
AAGGTGGTGA GTTTCACAAA ATTAGCCAAA ACGCATTCTG CACTTGATGC TGTCGATAAA
AACTATCAGT ACCAGCGTAT GATTGGCATC AATAAGTTCT TGGGATTTTG TGCTTGGGAA
TTGTGTAAAT TCAAACCAAA TGCGGCTGAA CTAAGAAGAG AAATCGAGGC AATGTCCGCG
CAGTTTAAGG CCCATTACCC TAAGGGATTA AGCAACTTAT CTAAAGCAAC ACACGCAGAA
GCAGATGACT TTAAAGCCTT CTTGGAAGTC GCGCATCCCA ATCATCCGCA AAACCCCTTC
TCAAATTTCG AGATAAAATT GAGAAACTAT CTACTAATCC AAATTTTGTA CTGGACAGGA
TGTCGACCAT CAGAAGTGTT GTCTCTCACA TTAGATGATA TTGGGCACGA TATAGATCAG
CCTACTTTAC GGTTTATTAG GCGTCATGAT GACATCAATG ATCCTCGTAA AGTTCAGCCT
ACCTTGAAAA CACAGGAGCG TGAAATAAAC ATCCCTCCAG CTCTATACAC CGATCTCGAA
TATTACATCA GAGCGATTAG GCCAATATTT AGCCGTTCCA AATCACACCC ATATATTTTT
GTCCATCACA AAGGTGGAAT GAAAGGCTCG GCGATGACAG ACAAAGCTTT TTCTGAAGCA
GTAATACCCA AGCTTAAAGC AGTAGATAAG ATGTTTATCA ACATTCAGCG TAGAGGATTT
CGCATTTATT TCAATGAAAG GTTGTCAGCT CAAGTTGATA TGCATAATGA GGGTATTAGC
GAGCAGATTC TCGTTGCCGA GAAGCAAGGT TTGTATGAAA AGGTAAAAGT GCTCAAGTCA
GAGCTGATTA AAGACGGCGA TGAAATTAAT ATGCGGATGA TGTTAAATGG TCATAGCAGT
CCTGACAGCG CAAGGCCCTA TTTAAATAGA TTTGCAGAAC GTAAAGCTAG AGATATACAT
AAGCGCATGA TGTTGGACAT TAGTTCAGCA ACAAAGGAAA TAAAAAATGG TAGAAGCAGT
TAG
 
Protein sequence
MKVVDYIFSE GERRSLLVSE DSRIDFWSTL YVTAELRQDH KQTSIKKELY SIKLLRKWEQ 
LHTRDLLAEI RQLNFPSRET IKSIKHFCGI SSKAENSKSA KVVSFTKLAK THSALDAVDK
NYQYQRMIGI NKFLGFCAWE LCKFKPNAAE LRREIEAMSA QFKAHYPKGL SNLSKATHAE
ADDFKAFLEV AHPNHPQNPF SNFEIKLRNY LLIQILYWTG CRPSEVLSLT LDDIGHDIDQ
PTLRFIRRHD DINDPRKVQP TLKTQEREIN IPPALYTDLE YYIRAIRPIF SRSKSHPYIF
VHHKGGMKGS AMTDKAFSEA VIPKLKAVDK MFINIQRRGF RIYFNERLSA QVDMHNEGIS
EQILVAEKQG LYEKVKVLKS ELIKDGDEIN MRMMLNGHSS PDSARPYLNR FAERKARDIH
KRMMLDISSA TKEIKNGRSS