Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0577 |
Symbol | |
ID | 5752294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 667190 |
End bp | 669112 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641286839 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001553015 |
Protein GI | 160873699 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0430169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCCG ATGAAAGAAC TTTCCGTGAA CTCGGCCTAT CCGAGAATTT GTTGCGTGCT CTTGACGAGC TAGGTTATGA AAAACCAACG CCAATCCAAT CAGCCAGTAT TGATCCACTT ATGGCTGGCA AAGATATTTT AGGTCAAGCG CAAACAGGTA CAGGTAAAAC TGGCGCCTTC GCTTTACCAC TATTAAACAA AGTTACCAGC CAAACTACAC CGCAAATTTT AGTCTTAGCA CCAACACGTG AATTAGCCGT GCAGGTTGCT GAAGCGTTCA GTAGCTATGC CAAATTTATG AAGAATTTCC ACGTTCTTCC TATCTATGGC GGCCAAAGCA TGCAACAACA GTTGAATGCC CTGAAACGCG GCCCACAAGT TATCGTTGGT ACGCCAGGTC GTGTTATGGA CCATATGCGT CGCGGCACCT TGAAACTCGA CTCATTACAA GCTTTAGTGC TTGATGAAGC CGATGAAATG TTAAAAATGG GCTTCATCGA TGATATCGAA TGGATCCTTG AGCACACGCC AAGCGAGCGC CAACTGGCGT TATTCTCTGC CACTATGCCA GAGCAAATTA AGCGTGTAGC TAACCAGCAC TTACGTAATC CTGTACATGT TCGTATCGAA TCAAGCCAAA CGACGGTTGA GTCAATCGAA CAGCGTTTCG TACAAGTATC ACAACACAAC AAACTTGAAG CTTTAGTACG TGTATTAGAA GTTGAAAACA CTGAAGGTGT GATCATATTC GTACGTACTC GTAACTCATG TGTTGAGTTA GCTGAAAAGT TAGAAGCCCG CGGTTACGCT TCATCACCAC TACACGGTGA CATGAACCAG CAAGCCCGTG AGCGTGCAGT TGACCAACTG AAACGTGGCA AGTTAGACAT ACTGATCGCG ACTGACGTTG CTGCCCGTGG TCTTGACGTT GAGCGTATCG GTCACGTTGT AAACTACGAT ATTCCGTATG ATGCCGAAGC TTATGTACAC CGTATTGGCC GTACAGGCCG TGCTGGCCGT ACTGGTATGG CGATCCTGTT TGTAACTAGC CGTGAAATGC GCATGCTGCG CACTATCGAG CGTTCAACTA ACAGCCGCAT TTCACCAATG AAAATCCCAA GCCCAGAGAC TGTTGCAGAA CGTCGTCTGT CTCGCTTAGG TGAGCAATTG GCTGAGACGA TCAACGGCGA TTTAGATTTC ATGAAAGAAG CTGTTGCTCA ATTATGCCAA CAGTTAGAAG TCGATACTGA TCTGCTAGCC GCTGCATTAT TACAGCAAGT TCAACAAGAA CGTCCTTTGC AATTGCCAGC AATTCAAGAA CGTGCTCGTG ATGAACGCAG TGAACGTGCT GAACGTAGCG ACCGCGGAAG TGATCGTGGC GACCGTGGTG GTGAGCGTGG TGAACGCAGA AGTCGCGAAC CGCGTCCAAT GCCAGCAAGC TTAGGTTCAG CTGAAGCGTT GAAAGACAAC CCAGATTTGA AAATGTGCCG TTACGTGATC GACGTAGGTC GTGAGAATGG TGTAGGTGTG GGTAACATCG TTGGCGCTAT CGCGAACGAA GCTAACATCG ACAGCCGTTA CATTGGCGCA ATCCAACTTT ACGATGCAGT GACCACTGTT GACCTGCCAG ACGGCATGCC AAAAGACGTG TTACAGCACC TACGTAAAGT ACGTGTTTGT GGCAAGCCAT TGAACATCCG CGAAGCTGGC GATCAAGTAT TTGTTGATTC AGGCCGTAGT GCTCGTTCAG ACCGCCCTGC TGGTGACCGT AAACCACGTG GTGATCGTCC AACGGGTGAC CGCCCAGCTG GTGACCGTAA GCCACGCGCT GCGTCTACTG GTGACAAGCC ATTTGCTGAC CGCAAACCAC GTGCAGACAA GCCTGCCGGT GAGCGTAAGC CACGTAAACC ACGTGAAGAC TAA
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Protein sequence | MSSDERTFRE LGLSENLLRA LDELGYEKPT PIQSASIDPL MAGKDILGQA QTGTGKTGAF ALPLLNKVTS QTTPQILVLA PTRELAVQVA EAFSSYAKFM KNFHVLPIYG GQSMQQQLNA LKRGPQVIVG TPGRVMDHMR RGTLKLDSLQ ALVLDEADEM LKMGFIDDIE WILEHTPSER QLALFSATMP EQIKRVANQH LRNPVHVRIE SSQTTVESIE QRFVQVSQHN KLEALVRVLE VENTEGVIIF VRTRNSCVEL AEKLEARGYA SSPLHGDMNQ QARERAVDQL KRGKLDILIA TDVAARGLDV ERIGHVVNYD IPYDAEAYVH RIGRTGRAGR TGMAILFVTS REMRMLRTIE RSTNSRISPM KIPSPETVAE RRLSRLGEQL AETINGDLDF MKEAVAQLCQ QLEVDTDLLA AALLQQVQQE RPLQLPAIQE RARDERSERA ERSDRGSDRG DRGGERGERR SREPRPMPAS LGSAEALKDN PDLKMCRYVI DVGRENGVGV GNIVGAIANE ANIDSRYIGA IQLYDAVTTV DLPDGMPKDV LQHLRKVRVC GKPLNIREAG DQVFVDSGRS ARSDRPAGDR KPRGDRPTGD RPAGDRKPRA ASTGDKPFAD RKPRADKPAG ERKPRKPRED
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