| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0560 |
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| Symbol | |
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| ID | 5752277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 647615 |
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| End bp | 648778 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641286822 |
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| Product | O-succinylhomoserine (thiol)-lyase |
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| Protein accession | YP_001552998 |
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| Protein GI | 160873682 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGC GTCAATTAGC CACACTGGCA GTGCGTCAGG GTATCGAAAG CGATACTCAA
TATGGTGCAG TTGTGCCACC GATTTATTTG TCGACTAATT ACGCCTTCGA TGGTCATAAA
AATCCTCGCG AATTCGATTA CAGTCGTTCA GGCAACCCAA CACGCTGTAT TTTAGGCGAA
GCATTAGCGC AATTAGAAAA GGGCGCCACT GGCATAGTGA CCTGCACTGG CATGGCGGCC
ATCACCTTAG TGACCACTTT GCTCGGCCCT GATGACCTGT TGGTTGTGCC CCACGATTGT
TACGGCGGTT CTTACCGTTT ATTTACTAAC TTGGCGAAGA AAGGCCAGTT TAAGTTGATT
GTGGTTGATC AAACCGACAG CCAAGCGTTA GCCGCCGCTA TCGGGCAGAA TCCTAAGATG
GTGTGGCTCG AAACTCCATC TAACCCGCTA TTGCGAGTGG TGGATATCGA AGCCATTGCC
AAGGCGAGCC ATGAGGTCGG CGCGCTGGTG GTGGTCGATA ACACTTTTTT ATCGCCGATA
TTGCAACAAC CCCTATTGTT AGGCGCGGAT ATCGTTATCC ACTCCACCAC TAAATACATC
AATGGCCACA GCGATGTGGT TGGCGGCGCT GTGGTTGCTA AAGATGCACA AATCGGCGAA
AGCTTACATT GGTGGTCGAA CACGTTAGGC TTAACGGGGT CGGCTTTTGA TAGCTACTTA
ACCCTGCGCG GCCTACGTAC CTTAGCGGTG CGAATTCGTG AACATCAAAC CAATGCCCAG
CGCATTGTTG AGGTATTGAC GCAAAGCCCT GTGGTGAGCA AAGTTTATTA CCCTGGTCTT
GCGGATCACC CTGGTCATGC GATTGCAGCC AAGCAACAAC AGGGCTTTGG CGCTATGCTG
AGTTTTGAGC TCAAGGGCGG CGAGGCAGAA GTGGTGGCCT TTTTAGGTGC ACTCAGCTTA
TTTAGTGTGG CGGAAAGTTT AGGTGGCGTT GAAAGTTTGG TGGCCGTGCC CGCAACTATG
ACCCACAGAG CCATGGAGCC GCAGGCGCGT TTTGAGGCAG GCATTAAGGA CACCCTATTG
CGTCTATCGG TGGGTATTGA AGATGCCGCC GATTTAGTTG CAGATATTCA AGCAGGATTA
GCCGCCGTTG CGGCTTGTCA GTAG
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| Protein sequence | MAERQLATLA VRQGIESDTQ YGAVVPPIYL STNYAFDGHK NPREFDYSRS GNPTRCILGE
ALAQLEKGAT GIVTCTGMAA ITLVTTLLGP DDLLVVPHDC YGGSYRLFTN LAKKGQFKLI
VVDQTDSQAL AAAIGQNPKM VWLETPSNPL LRVVDIEAIA KASHEVGALV VVDNTFLSPI
LQQPLLLGAD IVIHSTTKYI NGHSDVVGGA VVAKDAQIGE SLHWWSNTLG LTGSAFDSYL
TLRGLRTLAV RIREHQTNAQ RIVEVLTQSP VVSKVYYPGL ADHPGHAIAA KQQQGFGAML
SFELKGGEAE VVAFLGALSL FSVAESLGGV ESLVAVPATM THRAMEPQAR FEAGIKDTLL
RLSVGIEDAA DLVADIQAGL AAVAACQ
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