Gene Sbal195_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0528 
Symbol 
ID5752245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp607620 
End bp608837 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content50% 
IMG OID641286790 
ProductABC-2 type transporter 
Protein accessionYP_001552966 
Protein GI160873650 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.089523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTGC TCATCGCGTT AATTCGCCGT GAGCTCAGTG CCCTGTGGCG CGATCCTTGG 
CAGTTGGCGC TGATCAGTTA TATTCCGCTG ATCGGGATTT TCTGCCTGTG GTGGCTGTTC
AGTGCAGGCT TACCGAGGCA ACTGCCGGTG GCGATTGTCG ATCAAGACCA CAGTCAATTA
AGCCGTATGC TGACCCGTCA GCTGAAGGCT AATCCTGTGA CTGATCCACA AAACTTCACC
GATTTAGCCG CGGCGGTGTC GGCGATGCAG CAGGCGAAAG TCTACGCTAT CGTGGTCTTT
CCCTATGATA TGAAAAAAGA TTTGCTCACT GGCCACAAGC CCACCATAGA TGTGCGCTAC
AACAGCCAAT TTTTGCTGGT GGGTAAGTTA CTCTCAAGCC AAATTCAGCT GAGTCTGGGT
GACGGCTTGT TGCAAGTAGC GGGCTTAAAA CAGCTCGCCA ACGGTACACC TAAATCCCAA
GTGGCAGTCA ATTTAAGCCC AATCAAAAGC CAAACAACGG CTTTGTTTAA CCGAAATAAC
AACTATATAG GCTTCTTAGT GCCGCCAGTG CTCGTTGCGC TTTGGCAATT ATTATCTATG
TTGGTCATGG CCAACAGCTT AAATCGAGAG CTGCATTTAG CGCCCACGAC TCAGGTCAAT
GGCATATCGA ATACCTTAAC CGAGCATTTT TGGCCTAAGG TGCTGGCGAA ATTGGTGTTG
TTTACGCCGA TATTGATGCT GCAGGGCTGC TTTATTTTAA CTTGGCTGTA CTTGTATCTC
GCGTTGCCGA TGGCGGGCAG TTTAGCCCTA TTGCTGTTAG CACAATTAGT GATGTTGCTG
GCGGTCTGGA GTCTGGTGTT ATTAATCTTT GTGGTAATGC GTGACAGTGC GCGGGTTATC
AGTTTTTGCA CCGCCTTATT TGCGCCCGCT TTTGCCTTTA TGGGGATCAC TTTCCCTACC
CATGATATGC CGCAATTGGC GCAGTGGTGG CGACAGATAA TGCCGTCGAG CCACTATATT
GAGTCCCACG TGAGTGTCGT CAGTTATGGC GCCGCTTGGC CGAATGTGGC GATCCAGCTC
AGCAGTTATT GGGGCTTTAT CTGTTTGCTG CCTTTGATAT ATTTGTTATC GCGTAAATTA
CTGCCGATCA CGATCACCGC CAATACTATC GTGACCGCAT ATGACTCGGA CGCAGCCTTA
CCTGCGAAGG AGCAATAG
 
Protein sequence
MALLIALIRR ELSALWRDPW QLALISYIPL IGIFCLWWLF SAGLPRQLPV AIVDQDHSQL 
SRMLTRQLKA NPVTDPQNFT DLAAAVSAMQ QAKVYAIVVF PYDMKKDLLT GHKPTIDVRY
NSQFLLVGKL LSSQIQLSLG DGLLQVAGLK QLANGTPKSQ VAVNLSPIKS QTTALFNRNN
NYIGFLVPPV LVALWQLLSM LVMANSLNRE LHLAPTTQVN GISNTLTEHF WPKVLAKLVL
FTPILMLQGC FILTWLYLYL ALPMAGSLAL LLLAQLVMLL AVWSLVLLIF VVMRDSARVI
SFCTALFAPA FAFMGITFPT HDMPQLAQWW RQIMPSSHYI ESHVSVVSYG AAWPNVAIQL
SSYWGFICLL PLIYLLSRKL LPITITANTI VTAYDSDAAL PAKEQ