Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0520 |
Symbol | |
ID | 5752237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 595438 |
End bp | 595926 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641286782 |
Product | rod shape-determining protein MreD |
Protein accession | YP_001552958 |
Protein GI | 160873642 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2891] Cell shape-determining protein |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00293581 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTTTC AAGCAGCCAA TGGGCGCTTC ATTGTTTGGG TGACATTATT TATCGGCGTG ATCAGCCAGA TCATGCCTTT GCCGAGTGTG GTCGATGCTT GGCGTCCCGA CTGGTTGTTG ATGATTGTGC TCTACTGGTC TATCGCATTA CCCCATAGAT ACAACATTTT AACCGCTTGG GTCTTAGGCC TAGTGTTGGA TATTTTATTG GGTGCCACCT TAGGTGTGCG CTCTTTAGCG ATGTCTTTGG TGATTTATGT CGCCATCTTG CATTGCCAGC GATTGCGAAA TTTCCCTAAG TGGCAACAGT CGTTGGTGAT CATGCTGCTC ATTTGTATGT ATCACTTAGT GATTTACTGG GTCGAGTTTG TCATGCAAGA GGCGGTCTTC GATACGGATC TATTCTTACC TGCGATTTCA GGATTAGTGA TCTGGCCTTG GATATTTTGG ATTCTACGTC GGGTTCGACG TCATTATAAG GTTCGCTAA
|
Protein sequence | MSFQAANGRF IVWVTLFIGV ISQIMPLPSV VDAWRPDWLL MIVLYWSIAL PHRYNILTAW VLGLVLDILL GATLGVRSLA MSLVIYVAIL HCQRLRNFPK WQQSLVIMLL ICMYHLVIYW VEFVMQEAVF DTDLFLPAIS GLVIWPWIFW ILRRVRRHYK VR
|
| |