| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0514 |
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| Symbol | |
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| ID | 5752231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 586480 |
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| End bp | 587034 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641286776 |
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| Product | MSHA pilin protein MshD |
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| Protein accession | YP_001552952 |
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| Protein GI | 160873636 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0167076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATTA ATCCTCGGTT GCTATTGTGC AAAGCATCAG TAAAAGCATC CAAAAAAGCC
AAACCACAGC AGGGTTTTAC CCTTATCGAA TTAGTGATTG GCATGCTGGT GATTGCCATT
GCAATAGTGA TGCTAACCAG CATGTTATTC CCCCAAGCTG ATCGTGCGGC CAGTACCTTA
CATAGAGTAC GCAGTGCTGA GCTTGCACAT TCGGTGATGA ATGAAATCTG GGGTAAACGT
TACGATCAAA ACACTAATGC CAATGGTGGC ACACCAGCCT GTGGTAGTCC GCTCGGTAGT
AATTGTTCAA CGTCATTAGG CCCTGAGTTC GGTGAGAGTC GTAACAACTT TAACGATGTG
GATGATTACA ACGGCTTAAA TGAAACCGCG ACTATGCTCA ATTCGACCCA AACCTATGCA
AATGCTTATC TTAACTATCG CTTAAGCGTC ACTGTCGCCT ATGGGCCTGC GCCTAATACT
AAGCTAGTCA CCATTAATGT GACTACGCCC GACAACGAAG TGATTACTTA CAATATGGTG
AGGAGTAATT ACTGA
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| Protein sequence | MRINPRLLLC KASVKASKKA KPQQGFTLIE LVIGMLVIAI AIVMLTSMLF PQADRAASTL
HRVRSAELAH SVMNEIWGKR YDQNTNANGG TPACGSPLGS NCSTSLGPEF GESRNNFNDV
DDYNGLNETA TMLNSTQTYA NAYLNYRLSV TVAYGPAPNT KLVTINVTTP DNEVITYNMV
RSNY
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