| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0507 |
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| Symbol | |
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| ID | 5752224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 579597 |
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| End bp | 580952 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641286769 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001552945 |
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| Protein GI | 160873629 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGA TCAACAAGAT GTTGCAGGAT CTCGACAAAC GTCAGCAGGG GCACGAACTT
AGTAACGTCA CTCAACCGCA GGTGCAATAT TTAGCTCGCA GGCGTTCATC ATCTCACTGG
CTGCTGCTCT GTGGTTTTTC ACTGCTATTC GGTGGCGGCA CGGTTTATGG CTGGCAATTT
TTCATGGCAG AGCCTGCAGA AGCGACAGCT TCATCTCAAG CGCAGGAACA AAATACTTTA
ACCGCCCAAA CTGAGTCTGT GCGGATCGAC AGTGTTGCCT CAGAAGAAGC TTCACCTAAC
GTCGATGCCG CTGCTAAACC ATTGAAGCTT GCGACGACAC AGAAGATTGC GGCGGCGATG
ACAGCCAATA GTGAAGAGTT TGAACCAAGT GCCACCGAAG TGGCATCGAG TCAGGCACCA
GAATTGGGAA CCGCAAAAGA AGCTGAGCAT GAGCAACAAG CGCAGTCTCA GTCGCAACCC
CAACAAAAAC CACAAGCAGA CGTGAGCCTT GAACTCGCAA ATGATCAGGT TGATACGGTA
AGCGAGCCAA GCCACTCGCA GCCAAGCCAT TCACAGCCAA GTAGTGCGAC ATCGAGTGTG
CGTAGCGCCG AGGTCACTGT AGCTGCACCC TCTGCGTTAA TGATGTCGGA GCGGGCCTGT
GTTGCCGCCG ATAATGAAGG TAATGCGAGC AATGGGCTTA ACGACGCTGA TGCAGGCACT
AATCGACTCG CGCCCAAAGA ACAAGGGCAA ATGGCGATTA CTGAGGTGAA GTTAACGCCA
AAGCAGCTGG CAAAGAAGCG GTTTACGTTA GCGAGTGAGG CAGAAAGGGA TGGCAAGCTC
AAAGATGCCA TTAGTTATTA TGAGCAAACC TTGGCGCTTG AACCCAGCAT GCACGAAGCG
CGCAAGCAAT TAGCTGCACT GCATTATGGC CAAGGTCAAT TAGCCAAAGC CAGTGAAGTG
TTGCAGCAAG GCATGCTGTT ATTCCCGCAG CAGTTAGACT TTGCCTTATT GCTCGCTCGG
GTTCAGCAAG CCGCTGGTCA GGCTGATCTC GCATTAGTGA CGTTAGCTAA CATACCTGAT
ACGCATCCGC TGGCGAGACA AAAGTGGATG GCACAATCGG ATCTGGCGCA AAAGCTAGGG
CAGTTTTCCG TTTCGGAACA AGCCTACAGG CAGTTATTAC AACAAGAACC CCAACAGGCT
AAATGGTGGA TGGGACTAGC TTATGCGCTT GATTCGCAGC AGCAATTTAC CCAAGCACGC
CAAGCCTATC GGACTGCATT AGGCCACAGA GGCTTATCGG CGCAGGCGAG TGCCTTTATC
GAACAACGTT TGACTCAGCT AGGAGATAGC CAATGA
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| Protein sequence | MSVINKMLQD LDKRQQGHEL SNVTQPQVQY LARRRSSSHW LLLCGFSLLF GGGTVYGWQF
FMAEPAEATA SSQAQEQNTL TAQTESVRID SVASEEASPN VDAAAKPLKL ATTQKIAAAM
TANSEEFEPS ATEVASSQAP ELGTAKEAEH EQQAQSQSQP QQKPQADVSL ELANDQVDTV
SEPSHSQPSH SQPSSATSSV RSAEVTVAAP SALMMSERAC VAADNEGNAS NGLNDADAGT
NRLAPKEQGQ MAITEVKLTP KQLAKKRFTL ASEAERDGKL KDAISYYEQT LALEPSMHEA
RKQLAALHYG QGQLAKASEV LQQGMLLFPQ QLDFALLLAR VQQAAGQADL ALVTLANIPD
THPLARQKWM AQSDLAQKLG QFSVSEQAYR QLLQQEPQQA KWWMGLAYAL DSQQQFTQAR
QAYRTALGHR GLSAQASAFI EQRLTQLGDS Q
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