Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0506 |
Symbol | |
ID | 5752223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 578692 |
End bp | 579600 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641286768 |
Product | MSHA biogenesis protein MshM |
Protein accession | YP_001552944 |
Protein GI | 160873628 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCAGA AGCATTTTGG CTTAAACCAA GCCCCATTTT CATTGACACC CAATACCGGA TTTTTTTTCG GCCTATCGCC ACACGTAGAA GCCCTGCAAG TGTTGCAAAC TGCGCTACAA ACGGGTGAAG GTTTTATCAA GGTGACAGGG GAGGTGGGGA CAGGTAAAAC TCTGATTTGC CGCAAGCTTA TCAATGAATT ACCGACTAAG TTCCATTGCG CCTATCTACC CAATCCTTAC CTTACGCCTG CAGAGTTACG CTGGGCGGTG GCGAGTGAGT TAGGCCTTAA ATACGCCAGC AATATCGACC AGCAGCAGCT CACTGGGCTT ATCCAGCAGC AGCTTTTAGC TTTGAGCGCC CATGGTCACG CCATCGTATT AGTGCTCGAT GAAGCGCAGG CATTGCCGGA CGACAGTTTA GAGGCGCTGC GGTTATTCAC TAATCTCGAA ACCGAGACGC GTAAGTTATT GCAGGTGGTG TTATTTGGGC AACCCGAACT TGATGAAAGA CTTAAACGCC AAGAATTCAG GCAATTAAGA CAACGTATTA CTTTTAGCTA CAACCTTCGC CCACTGACAT GGGATGAAAC CGATGCTTAT ATTCGTCACA GATTAGCCAT AGCAGGGCGT GCGGGCGAAC CACTCTTTAC ATCACGGGAA ACACGTCAGA TTGCTTATGC GTCCCGAGGG ATCCCCAGAT TGATCAATAT TCTTGCCCAC AAAGCCTTGT TACTGAGTTT CGGCGAGGGC GCTACGCGTG TGCAAACCTC CCACGTTAAA GCGGCGATTC AAGACACTGA AGATGCGAGC GTGCGCCGAT TATTGTCGTG GAAATGGCTA CCTTTTTTCT CTCTGATAAC TGTGGTGTTC GGTTTGGGAT TACAACACGT TTTGAGGAGT GTTGTATGA
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Protein sequence | MYQKHFGLNQ APFSLTPNTG FFFGLSPHVE ALQVLQTALQ TGEGFIKVTG EVGTGKTLIC RKLINELPTK FHCAYLPNPY LTPAELRWAV ASELGLKYAS NIDQQQLTGL IQQQLLALSA HGHAIVLVLD EAQALPDDSL EALRLFTNLE TETRKLLQVV LFGQPELDER LKRQEFRQLR QRITFSYNLR PLTWDETDAY IRHRLAIAGR AGEPLFTSRE TRQIAYASRG IPRLINILAH KALLLSFGEG ATRVQTSHVK AAIQDTEDAS VRRLLSWKWL PFFSLITVVF GLGLQHVLRS VV
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