Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0505 |
Symbol | |
ID | 5752222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 577006 |
End bp | 578685 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641286767 |
Product | pilus (MSHA type) biogenesis protein MshL |
Protein accession | YP_001552943 |
Protein GI | 160873627 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR02519] pilus (MSHA type) biogenesis protein MshL |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGA TTAAATACTT TACACCTCTG CTCTCACTTT GCCTTGTGGC GTGTCAGACC ACAAACAGGC CACAGCCGGA GGCGAGTAAG GCGGAATTAG CGGCCTCAAT GGCGACGGCT ACAGCATCAA CGACGCCACC GCCTGCGACT ATGCCGGATG CGGTTCAGCG AGAATTGAAT TCGGGCGCTT TACTGTCAGG TTTAACCCCT GCGCTGGAAC CTGAGCGTCG TTTTGATGTC TCTGCCCATG ATGTGGATGC CAAAGTATTT TTTCCAAGCT TAGTCCAAGG TACGCCGCTG AGTGTTGCCG TGCATCCTGA TGTGCAAGGT ACGATTTCGC TATCCCTTAA AGGTGTAACC TTAAGCGAAG CGATTCAAGT GGTTGAAGAT ATCTACGGTT ACGAAGTGAG CCGTGAAGGG CGTATTCTAA GAGTGTTCCC CGCTGGAATG CGTACTGAGA CTTTCCCGCT GAATTATCTT TATATGGAGC GCGACGGCTT ATCAGTGACC TCTGTGAGTT CTGGACGGAT TTCTGATAGC AATAATTCCA ATAGTAATTC GAGCAATAAC AACTCAAATA ACAGTGGTTC GAGTAATAAC AGCTCCAACA GCAGTAATGG TAATAACTCC AGCAGCAATG GCAGCAGCGA TAGCAGTAAC GGCACATTTA TCCGCTCGCG CACTAAGACT GATTTTTGGG GCGAGCTGAA AGAAACGCTG ACGGCGATTA TTGGTGACAC AGGTAATGGG CGGCAAGTGG TGGTCACACC GCAGGCGGGT TTAGTGACCA TTCGTGCTTT CCCTAGTGAA TTACGCCAAG TTCGCACTTT CTTAAATTCT GCCGAGAGTC ATCTGCAGCG CCAAGTAATC TTGGAGGCTA AGATCATCGA AGTCACATTA TCTGATGGCT ATCAGCAAGG TATCCAATGG GAGAATGTGC TGGGTCATGT CGGCAATACG AATGTGAATT TTGGGACTTC GAAAGGCCCT GGGTTAAGCG ATAAAATCAC CTCGGCGATT GGTGGCGTGA CCTCGCTGAG TATTAAAGGC TCCGACTTTA CGACCATGAT CAATCTGTTA GATACCCAAG GCGATGTGGA TGTATTGTCT AGCCCAAGGG TAACAGCATC GAATAACCAA AAAGCGGTGA TTAAAGTCGG TACCGATGAG TATTTTGTCA CTGACGTTTC ATCGACCACA GTAGCGGGCG CAACGCCTGT GACCACTCCA CAAGTCGAGC TCACGCCGTT TTTCTCAGGC ATTGCCTTAG ATGTCACGCC GCAAATTGAT AGTGACGGTA ATGTGTTATT GCACGTGCAT CCATCCGTTA TCGATGTGAA AGAGCAGACT AAAGATATCA AAGTGAGTGA TGCTTCGTTG GAGCTACCTT TAGCGCAGAG TGAAATTCGC GAGTCTGATA CCGTTATCCG CGCCGCTTCC GGTGACGTAG TCATCATAGG TGGCTTGATG AAGAGCGAAA ATACCGAAGT CGTCTCGCAA GTGCCTTTGT TGGGGGATAT TCCTTTCCTC GGGGAATTGT TTAAAAACCG CAGCAAGCAA AAGAAGAAAA CTGAGCTGAT TATTCTGTTA AAACCTACGG TAGTTGGCGT CGATACCTGG AAAACTGAGC TACAACGTTC TAAGACCTTA TTAGATCGTT GGTATCCGGA GACAAAGTAA
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Protein sequence | MKAIKYFTPL LSLCLVACQT TNRPQPEASK AELAASMATA TASTTPPPAT MPDAVQRELN SGALLSGLTP ALEPERRFDV SAHDVDAKVF FPSLVQGTPL SVAVHPDVQG TISLSLKGVT LSEAIQVVED IYGYEVSREG RILRVFPAGM RTETFPLNYL YMERDGLSVT SVSSGRISDS NNSNSNSSNN NSNNSGSSNN SSNSSNGNNS SSNGSSDSSN GTFIRSRTKT DFWGELKETL TAIIGDTGNG RQVVVTPQAG LVTIRAFPSE LRQVRTFLNS AESHLQRQVI LEAKIIEVTL SDGYQQGIQW ENVLGHVGNT NVNFGTSKGP GLSDKITSAI GGVTSLSIKG SDFTTMINLL DTQGDVDVLS SPRVTASNNQ KAVIKVGTDE YFVTDVSSTT VAGATPVTTP QVELTPFFSG IALDVTPQID SDGNVLLHVH PSVIDVKEQT KDIKVSDASL ELPLAQSEIR ESDTVIRAAS GDVVIIGGLM KSENTEVVSQ VPLLGDIPFL GELFKNRSKQ KKKTELIILL KPTVVGVDTW KTELQRSKTL LDRWYPETK
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