| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0496 |
|---|
| Symbol | |
|---|
| ID | 5752213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 566665 |
|---|
| End bp | 568860 |
|---|
| Gene Length | 2196 bp |
|---|
| Protein Length | 731 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641286758 |
|---|
| Product | primosomal protein N' |
|---|
| Protein accession | YP_001552934 |
|---|
| Protein GI | 160873618 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
|---|
| TIGRFAM ID | [TIGR00595] primosomal protein N' |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTGT TTGTCGAAGT TGCGTTACCT GTGCCTATGC GGCAAACCTT TAGCTACCGC
GTACCCGAAA CTTATCCTAG TACACCGCAG ATAGGCGTGC GCGTTAAAGT CCCCTTCGGT
CGTCAACAAT TAATCGGATT AGTCACAGGT ATCACTGATA CATGTAGCTT AGCGCCTAAG
CAGATTAAGT CTGTGCTTGA GTTTATCGAC GATAAACCTT TGTTGCCTGA ATCACTTTAT
AAATTAACCC TTTGGGCCGC GAGATACTAT TTTTGCAGCC AAGGGCAGAT GCTAACCCAA
GCCTTACCTG TGGCCCTACG TAAAGGGCTC GATGCCGCGC CGCAAAAGAT CCAATTCTGG
CAATTAACTG AGATAGGCCA AAATATTGCG CCAGAAGCGG TTAAGCGAGC ACCCGCACAG
AAAAAATTAC TCGAGTTACT CAAACCCGCC AGCTTAACCC AAGAAGAAGT GATCAGCTTA
GATATCAGTA AAGCGGCACT GAAAGCCCTA GAAGATAAAG GCTGGGTGGC ACGCCATGAA
AAAATTGCCG AGCTTAACCT CGACTGGCGC ACCACACTCG AAATGGACGA AACGCCGCAT
AAACTCAATA AAGAACAAGC CGTCGCCGTT GCCACTTTAA ATCTGCAACA AGGGTATCAC
TGTACTTTAT TAGAAGGCAT TACCGGTTCG GGTAAAACGG AAGTCTATTT GGCGGTGCTG
GAAGAAATTC TTAAGCAAGG CAAGCAAGCG TTAATTTTAG TGCCTGAAAT CGGTTTAACA
CCCCAGACAA TCAATCGCTT TAAGCGCCGT TTTAAAGTCA ATGTCGCCAT ATTGCACTCA
GGGTTAACCG ACAATCAAAG ACTCGAAGCT TGGCGCCAAG CCCGCTGCGG TCAGGCCGCC
ATCATTATCG GCACCCGCTC GGCCTTGTTC ACGCCGATGG CCTATCCCGG CATCATCATA
CTCGATGAAG AACACGACAG TAGCTTCAAG CAACAGGAAG GTGTCGGTTA TCACGCCCGC
GACTTGGCAG TCATGCGTGG CCATTTAGAA TCAATTCCTG TGATATTGGG CACGGCAACC
CCCTCACTCG AAAGTCTACA AAATGCCTTA AGTGGCCGTT ACCATCATTT GCAATTGGGT
GAGCGCGCTG GCTCGGCTAA AAAAGTGCGC CAAGGGATTA TCGACATTAA AAATATGCCG
TTAAAAGCAG GAATGTCGGT GCCGCTGCTG AACGAAATCC GTCTGCATTT AGACGCAGGC
AACCAAGTAT TACTGTTTCT CAATCGCCGC GGCTTCGCAC CAGCCCTGCT TTGTCACGAG
TGTGGGCACT TACACGAGTG CGACCGCTGC GACGCGTTTT TCACAGTTCA TCAATCCCTT
GGTGAAATTT GCTGCCACCA TTGTGGCAAT CAATATGCCA TCCCTAAGCA ATGCCACAAA
TGCGGTAGCA CTATGCTGAT GGGCCAAGGT ATAGGCACAG AGCAACTCGC CGAGGCACTG
CAACTGGAGT TTCCGAAACA TCCAGTAGTG CGCATCGACC GCGATACCAC TCGCTTGAAA
GGCTCACTAG AAACCCACTT AAACGCAATT CATAAGGGCG AATATAAAAT CCTCGTCGGC
ACGCAAATGC TGGCTAAGGG TCATCACTTC CCTGATGTGA CGCTTGTTGG GCTACTCGAT
GTCGATGGCG CCTTATTTAG CGCCGACTTT CGCGCGCCCG AGCGTTTTGG GCAGCTCTAT
ACCCAAGTCG CCGGTCGTGC GGGCCGTGCC AGTAAACCCG GCACGGTATT ATTGCAAACT
CACCAGAGCG ACAATCCCAT TTTGCGGGAT TTACTGCACC GCGGTTATGG CGAGTTTGCT
CGCAGCCAGT TAAAAGAACG TCAACAAGCA CTGCTGCCGC CAGTATGGCA CATGGTGTTG
GTGCGCGCCG AAGCCCATTT AGCCAGTGAT GCCGATAACT TTCTCAACGC CTTCGCCGCG
CTTTTGCCGC AAGATAAAGA ATTTGAGGTA ATTGGTCCTA TGCCAGCGCC CTTAGATAAA
AAAGCCGGCA AGTTCCGTCG CCAACTGCTA TTCCAAGCTA AAAACCGCAA CCGTCTGCAG
CAAGAGTTTG AACGTATTCA TCCGCTTGTA GAGCAGCTTA TCGAAGCCAA GCGCTGCCGA
TGGAGCTTAG ACAGAGATCC GCAGGATCTC CTCTGA
|
|---|
| Protein sequence | MSLFVEVALP VPMRQTFSYR VPETYPSTPQ IGVRVKVPFG RQQLIGLVTG ITDTCSLAPK
QIKSVLEFID DKPLLPESLY KLTLWAARYY FCSQGQMLTQ ALPVALRKGL DAAPQKIQFW
QLTEIGQNIA PEAVKRAPAQ KKLLELLKPA SLTQEEVISL DISKAALKAL EDKGWVARHE
KIAELNLDWR TTLEMDETPH KLNKEQAVAV ATLNLQQGYH CTLLEGITGS GKTEVYLAVL
EEILKQGKQA LILVPEIGLT PQTINRFKRR FKVNVAILHS GLTDNQRLEA WRQARCGQAA
IIIGTRSALF TPMAYPGIII LDEEHDSSFK QQEGVGYHAR DLAVMRGHLE SIPVILGTAT
PSLESLQNAL SGRYHHLQLG ERAGSAKKVR QGIIDIKNMP LKAGMSVPLL NEIRLHLDAG
NQVLLFLNRR GFAPALLCHE CGHLHECDRC DAFFTVHQSL GEICCHHCGN QYAIPKQCHK
CGSTMLMGQG IGTEQLAEAL QLEFPKHPVV RIDRDTTRLK GSLETHLNAI HKGEYKILVG
TQMLAKGHHF PDVTLVGLLD VDGALFSADF RAPERFGQLY TQVAGRAGRA SKPGTVLLQT
HQSDNPILRD LLHRGYGEFA RSQLKERQQA LLPPVWHMVL VRAEAHLASD ADNFLNAFAA
LLPQDKEFEV IGPMPAPLDK KAGKFRRQLL FQAKNRNRLQ QEFERIHPLV EQLIEAKRCR
WSLDRDPQDL L
|
|---|
| |