Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0486 |
Symbol | |
ID | 5752203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 556943 |
End bp | 558118 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641286748 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_001552924 |
Protein GI | 160873608 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000602971 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAT TTCAATCTAT TGATGTTGCT GACTATTATG ACGTGGATAC ATTCAAGCGT ATTGAAGCGT TTGCCAAAGA CAAAGCAACC CCGTTCGTAG TGATTGATAC CAGTATCATA GCGAAACAAT ACGATGACAT GGTTAATAGT TTTCCTTACG CCAACGTTTA TTATGCAGTT AAGGCAAACC CCGCGGCCGA GATCTTATCT TTACTTAAAG ATAAAGGGTC AAACTTTGAT ATTGCCTCGA TTTATGAGCT AGATATGGTT ATGAATGTCG GCGTGACAAC CGACCGAGTC AGCTACGGCA ATACCATTAA AAAGCGTCAA GATGTACGTG CATTTTATGA GCGTGGTGTG CGTATGTATG CATCCGACTC AGAAGCCGAT CTGCGAATGA TCGCCGAAGA AGCTCCGGGA TCGCGTATTT ACGTGCGCAT TTTGACCGAA GGTACAGATA CGGCTGATTG GCCGTTATCG CGTAAATTCG GCTGCCAAAA CGAAATGGCC TATGAGCTAT TAGTATTGGC GCAGGAATTG GGTTTAGAAC CTTTTGGTAT TTCGTTTCAC GTCGGTTCAC AGCAACGTGA CATCGGTGCT TGGGATTCTG CCATAGGTAA AGTGAAAAGC ATTTTTGACC GTCTGCGTGA TGAGCACAAT ATCACCCTGA AGATGATCAA CATGGGCGGC GGTTTCCCTG CTAACTATAT TGATAAAACC AATCAATTGG GTGTGTATGC CGAGCAGATC ACTCACTTCC TGAAGGAAGA TTTCGGTGAC GATTTACCGC AAATTATTCT GGAGCCGGGT CGTTCGTTGA TTTCTAACGC GGGGATTTTA GTGTCTGAAG TGGTACTGAT CAGCAAAAAA TCCTACACAG CGTTAGAGCG TTGGGTGTTT ACCGATGTGG GTAAATTCTC TGGCTTAATT GAAACGATGG ACGAGGCGAT TAAGTTCCCG ATTTATACCG ATCGTCAAGG CGAGCTGGAT AAATGCGTGA TTGCCGGCCC AACCTGCGAC AGTGCCGATA TCATGTATGA GCACTACAGC TACGGTTTAC CGAATGACTT AGCTATTGGT GACCGCATGT ATTGGTTAAC CGCTGGCGCT TATACGACGA CGTATTCGGC AGTGTGCTTT AACGGTTTCC CACCGCTGAA AGATTACTAT CTGTAA
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Protein sequence | MSQFQSIDVA DYYDVDTFKR IEAFAKDKAT PFVVIDTSII AKQYDDMVNS FPYANVYYAV KANPAAEILS LLKDKGSNFD IASIYELDMV MNVGVTTDRV SYGNTIKKRQ DVRAFYERGV RMYASDSEAD LRMIAEEAPG SRIYVRILTE GTDTADWPLS RKFGCQNEMA YELLVLAQEL GLEPFGISFH VGSQQRDIGA WDSAIGKVKS IFDRLRDEHN ITLKMINMGG GFPANYIDKT NQLGVYAEQI THFLKEDFGD DLPQIILEPG RSLISNAGIL VSEVVLISKK SYTALERWVF TDVGKFSGLI ETMDEAIKFP IYTDRQGELD KCVIAGPTCD SADIMYEHYS YGLPNDLAIG DRMYWLTAGA YTTTYSAVCF NGFPPLKDYY L
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