Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0462 |
Symbol | hslU |
ID | 5752179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 531251 |
End bp | 532579 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641286726 |
Product | ATP-dependent protease ATP-binding subunit HslU |
Protein accession | YP_001552902 |
Protein GI | 160873586 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAA TGACCCCCCG TGAGATTGTC CACGAGCTGG ATGCACACAT TATTGGCCAA CAAAAGGCCA AACGTTCTGT TGCTGTTGCC CTGCGTAACC GCTGGCGCCG GATGCAACTG GATGTGGATT TCCGTCAAGA AGTCACCCCA AAAAACATCC TGATGATTGG CCCCACTGGC GTAGGTAAAA CTGAAATTGC CCGCCGTTTA GCTAAGCTTG CCAACGCGCC TTTTATCAAG GTCGAAGCGA CTAAATACAC AGAAGTGGGT TATGTCGGTA AAGAAGTCGA GCAAATCATC CGCGATTTGA CCGATATCGC CATCAAGCTG ACCCGTGAAC AGCAAATGGG TAAGTGCCGC CAACGCGCCG AAGAAAATGC CGAAGAGCGC ATTCTCGATG CCCTGTTGCC TAAGCCGAAA AACGACTGGG AAAGCACAGA AACCGATTCC AGCTCAAACA CCCGCCAAGT GTTCCGCAAG AAGCTGCGCG AAGGCCAATT AGACGATAAA GAAATCGATA TCGATGTGGC ACAACCACAG GTCGGCGTCG AAATTATGTC GCCTCCTGGC ATGGAAGAAA TGACCAATCA GCTACAAAGC CTGTTTAAAA ACATGGGCCA AGCACCGGCA AAACGTCGCA AGATGAAGAT CAAAGAAGCC TTTAAGCTAT TGATCGAAGA AGAAGCGGCC AAACTGGTTA ATCAAGAAGA TTTAAAAGAG CAAGCCATTG AAATGGTTGA GCAACACGGC ATAGTTTTCC TCGACGAAAT CGATAAAATC TGTAAGCGCG GCGAAACCTC AGGCCCAGAC GTTTCCCGTG AAGGCGTGCA ACGTGACTTA CTGCCGCTGA TCGAAGGCTG CACTGTCACC ACTAAACACG GCATGGTTAA AACCGACCAC ATTCTGTTTA TTGCCTCGGG CGCATTCCAG ATGTCAAAAC CGTCGGATTT AATTCCTGAA TTACAGGGTC GTTTGCCTAT TCGTGTCGAG TTAGATGCGC TGTCAGCCAA TGATTTTAAA CGCATTTTGA CCGAGCCACA CGCCTCGCTG ACCGAGCAAT ATATCGCGCT GATGAACACA GAAGGCGTGA AAGTTGAATT CAGCGAATCG GGCATCGACA GCATTGCAAA AGCCGCATGG CAAGTGAACG AGCGCACCGA AAACATCGGC GCCCGTCGTT TACACACAGT GATGGAAAAG CTGATGGAAG ACATCTCCTA CGAGGCATCG GAAAAATCGG GCTCCGCCTT TGTTATCGAC GCCGACTATG TCAGCGCCCA CTTAGATAAC TTGGTCCAAG ACGAAGATCT CAGCCGCTTT ATCCTCTAG
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Protein sequence | MSEMTPREIV HELDAHIIGQ QKAKRSVAVA LRNRWRRMQL DVDFRQEVTP KNILMIGPTG VGKTEIARRL AKLANAPFIK VEATKYTEVG YVGKEVEQII RDLTDIAIKL TREQQMGKCR QRAEENAEER ILDALLPKPK NDWESTETDS SSNTRQVFRK KLREGQLDDK EIDIDVAQPQ VGVEIMSPPG MEEMTNQLQS LFKNMGQAPA KRRKMKIKEA FKLLIEEEAA KLVNQEDLKE QAIEMVEQHG IVFLDEIDKI CKRGETSGPD VSREGVQRDL LPLIEGCTVT TKHGMVKTDH ILFIASGAFQ MSKPSDLIPE LQGRLPIRVE LDALSANDFK RILTEPHASL TEQYIALMNT EGVKVEFSES GIDSIAKAAW QVNERTENIG ARRLHTVMEK LMEDISYEAS EKSGSAFVID ADYVSAHLDN LVQDEDLSRF IL
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