| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0454 |
|---|
| Symbol | |
|---|
| ID | 5752171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 522103 |
|---|
| End bp | 522654 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641286718 |
|---|
| Product | two component Fis family transcriptional regulator |
|---|
| Protein accession | YP_001552894 |
|---|
| Protein GI | 160873578 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTT TGTTAATCGT CGAGGATGAC CTTTCTCTGG CGAGTATTTT AGGCCGACGG
CTTACGCGTC ACGGTTTTGA GTGCCGCCTA ACCCATGATG CCAGCGATGC TCTGCTGGTG
GCGCGGGAGT TTCGCCCTAG CCACATTTTG TTGGACATGA AACTTGCCGA AGCCAATGGC
TTAGGGTTAA TTGTGCCGCT ACGTAACCTG CTGCCTAAGG TGACCATGGT GTTGCTCACC
GGCTACGCCA GTATTGCCAC TGCGGTGGAA GCGATTCGCC TCGGCGCCGA TAATTATTTA
GCTAAACCTG TTGATACTCA AACCTTACTC GCCGCGCTGG AAATGGAAGG GCATTCCCAT
ACCCTTCAAG AAGATGAAGT CGATGACTCG CCCCTCAATC CTAAGCGTTT GGAGTGGGAG
CATATTCAGC AAGTGCTTAA TGCTAACCAA GGCAATGTGT CCGCTACCGC CCGACAATTG
GGAATGCATC GCCGCACCTT ACAACGTAAG TTACTCAAAA AACCTGTGGG TGAAAGTGGC
CATTTGAAGT AA
|
|---|
| Protein sequence | MKRLLIVEDD LSLASILGRR LTRHGFECRL THDASDALLV AREFRPSHIL LDMKLAEANG
LGLIVPLRNL LPKVTMVLLT GYASIATAVE AIRLGADNYL AKPVDTQTLL AALEMEGHSH
TLQEDEVDDS PLNPKRLEWE HIQQVLNANQ GNVSATARQL GMHRRTLQRK LLKKPVGESG
HLK
|
|---|
| |