| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0441 |
|---|
| Symbol | |
|---|
| ID | 5752158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 505676 |
|---|
| End bp | 506137 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641286706 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001552882 |
|---|
| Protein GI | 160873566 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2731] Beta-galactosidase, beta subunit |
|---|
| TIGRFAM ID | [TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.187891 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTCG ATACCTTAGC AAACCGCCAT ATTTATCAAT CCCTAAGCCC TCGGCTTGCC
ACAGCATTAG AACATCTTGC CACCACAGAC TTTAGTCAGC TGCCCGTGGG CAATTATCCC
CTCGATGGCG ACAATATTTT TGTGATAGTC AACGACTACC ACACTAAGCA TAAATCGACA
GAACCCTTTG AAGTACATCA AAAATATATC GATGTGCAAT ATGTGTTCAG CGGTGAAGAA
GAGTTTGGTT ATTTGCCACT AGCGGGCCAA ACACCCTCAA AGCCCTATTT TGACAAACAC
GATTACGCCG AGTTTGATTA CGAGACAAAC AAAGCCAATG CCTCTTATGT GCAACTCAAA
GCGGGTATGT TTGCGCTATT TTTCCCCGGT GACATGCATA TGCCAGGCAC TGGCGATATC
GCCACAGCAG TGCGTAAAGT CGTGATAAAA GTAAAGATCT AA
|
|---|
| Protein sequence | MIVDTLANRH IYQSLSPRLA TALEHLATTD FSQLPVGNYP LDGDNIFVIV NDYHTKHKST
EPFEVHQKYI DVQYVFSGEE EFGYLPLAGQ TPSKPYFDKH DYAEFDYETN KANASYVQLK
AGMFALFFPG DMHMPGTGDI ATAVRKVVIK VKI
|
|---|
| |