Gene Sbal195_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0439 
Symbol 
ID5752156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp503788 
End bp504402 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content47% 
IMG OID641286704 
ProductSNARE associated Golgi protein 
Protein accessionYP_001552880 
Protein GI160873564 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0969745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAAG CGCTACAACA TATCATCACC GAACTCACCC CTTGGCTGCA GCAATATGGC 
TATGTGCTGC TATTTGTCGC GATTGCTGTC GAGGGTTTTG GCATTCCAGC ACCGGGGCAA
TCCTTATTGA TTGTCGCCAG TTTATTAGCT GCTGCAGGGC AAATGTCACT GCCATTGGTG
TTGATCGTCG CAGCTTGCGC TGCACTCTGC GGTAACAGCT TGGGATATTT TATCGGTTGG
CGCTTTGGTG ATGTATTGCT TAAAAAGGGC TGGATAAAGC CACAATTGGA AGACAAAATC
CATGGCGTTA TTGGGCAATA TGGCATTGCC GCTTTAGTGC TGAGTCGTTT TGTTGAGGGA
TTAAAACAAT TTATGTTTAT CGGCTGCGGC TTGGCTAAAA TGCCACTTAA GCAATTTGTA
ATAGGTAATG TCCTAGCCAC CAGCATTTGG GTGGCACTTT TTGGGTTAGG CCCAGTGTTA
ATCCGCGATG AAATTGCTCC TATGCTGGCA TTTTACCACC AGCACAAATA TCCCACATGG
GCCATTGTCA GCCTAATACT CGCCGCGCTA ATCACTTTTA CTTGGCGCAG GTGGCAAACA
AAAAATCCGC AGTAA
 
Protein sequence
MPEALQHIIT ELTPWLQQYG YVLLFVAIAV EGFGIPAPGQ SLLIVASLLA AAGQMSLPLV 
LIVAACAALC GNSLGYFIGW RFGDVLLKKG WIKPQLEDKI HGVIGQYGIA ALVLSRFVEG
LKQFMFIGCG LAKMPLKQFV IGNVLATSIW VALFGLGPVL IRDEIAPMLA FYHQHKYPTW
AIVSLILAAL ITFTWRRWQT KNPQ