| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0427 |
|---|
| Symbol | |
|---|
| ID | 5752144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 493403 |
|---|
| End bp | 493918 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641286692 |
|---|
| Product | twin-arginine translocation protein, TatB subunit |
|---|
| Protein accession | YP_001552868 |
|---|
| Protein GI | 160873552 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1826] Sec-independent protein secretion pathway components |
|---|
| TIGRFAM ID | [TIGR01410] twin arginine-targeting protein translocase TatB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000467647 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGACG GTATCGGCTT TATGGAGCTG CTGCTGATCG GTGTTTTGGG GCTAGTGGTT
CTTGGCCCCG AACGTCTACC GGTTGCGGTG CGTTCGATAA CGAGTTGGAT CCGTGCGATG
AAACGCATGG CTAACTCGGT AAAAGAAGAA CTTGAGCAGG AGCTGAAGAT CGAGCAATTA
CATGCAGATC TTAAAAAAGC CGAGAGCAAA GGTTTATCTA ACCTCTCACC TGAACTCAAA
GAGTCTATTG AACAACTGAA GCAAGCGGCA CAGTCGGTGA ACCGTCCTTA TCAAGTTCAG
GATCCGGTAA AAGATACGCC TGCGCCAGAG AATCAAATAC ATTCTCCAGT TTCGAGCACA
GTTCAAACTA GCCAGGTTCA CACTAGTCCA GCTCAAGCGA GCCAAGCTAA TCCGACTGCC
ACTGTAGAGG CGAGTCCAAC GTCGGCATCT CCCGCTACTC CAAGTGAGCC ATCTCAGGGC
GCGGATACCC GTTCTAACCC GAAAGCCAAC GGATAA
|
|---|
| Protein sequence | MFDGIGFMEL LLIGVLGLVV LGPERLPVAV RSITSWIRAM KRMANSVKEE LEQELKIEQL
HADLKKAESK GLSNLSPELK ESIEQLKQAA QSVNRPYQVQ DPVKDTPAPE NQIHSPVSST
VQTSQVHTSP AQASQANPTA TVEASPTSAS PATPSEPSQG ADTRSNPKAN G
|
|---|
| |