Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0426 |
Symbol | |
ID | 5752143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 492644 |
End bp | 493399 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641286691 |
Product | Sec-independent protein translocase, TatC subunit |
Protein accession | YP_001552867 |
Protein GI | 160873551 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000454537 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCGCAAC AGCAGCCACT TATCAGCCAT TTGCTTGAAC TTAGGTCCAA GCTGCTAAAA TCCATTGCCA GCGTGTTATT AGTGTTCATT TGCAGCGTGT ACTGGGCAAA TGATATCTAC CATTACATGG CAATACCTTT AATGCAGTCT TTACCCCTTG GTGGCAGCAT GATTGCGACC GATGTCGCTG CCCCTTTCTT CGCGCCTTTT AAATTGACCC TAGTATTATC GTTTTTTGTG GCTGTGCCCT ATGTGTTGTT CCAGATCTGG TCCTTTGTCG CACCGGGTTT ATACAAACAT GAAAAACGTT TAGTGATGCC ACTGCTATTT AGCAGTACCT TATTGTTTTA TCTCGGTATC GCCTTCGCTT ATTACATAGT ATTCCCCGTC GTTTTTGGCT TCTTTGCTAA CAATGCCCCA GAGGGCGTTC AAGTTGCGAC CGACATTACC AGTTACCTTA ACTTCATTCT GAAGCTGTTC TTTGCCTTTG GTCTATCCTT TGAAATCCCT ATAGCCGTTG TTTTACTTTG CTGGGCGGGT GTGACAACAC CTGAAGAACT TAAGCAAAAA CGTCCTTATA TCGTCGTAGG CGCCTTCGTT GTGGGCATGC TGTTAACCCC ACCCGATGTA ATTTCCCAGA CTATGCTTGC CGTACCAATG CTGTTATTGT TCGAAGGCGG TTTATTAGCG GCTCGTTTCT ACAGCAAGCA AGGTGACGAC GAGTCAGACG AAGATAGCGA ACAAACAAAC GACTAA
|
Protein sequence | MSQQQPLISH LLELRSKLLK SIASVLLVFI CSVYWANDIY HYMAIPLMQS LPLGGSMIAT DVAAPFFAPF KLTLVLSFFV AVPYVLFQIW SFVAPGLYKH EKRLVMPLLF SSTLLFYLGI AFAYYIVFPV VFGFFANNAP EGVQVATDIT SYLNFILKLF FAFGLSFEIP IAVVLLCWAG VTTPEELKQK RPYIVVGAFV VGMLLTPPDV ISQTMLAVPM LLLFEGGLLA ARFYSKQGDD ESDEDSEQTN D
|
| |