Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0409 |
Symbol | |
ID | 5752119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 465578 |
End bp | 466960 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641286667 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
Protein accession | YP_001552850 |
Protein GI | 160873534 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000667129 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCCCTC TTTCTCTCGA AACCCTAAGT CAACACTTAG GTACGTTTCG AGTCGGTGAC GACGTCACCA TCGAAGATTT AAGCAGTGAT AGCCGCAAAA TCGGTGCTGC AACCCTGTTT GTTGCCTTAA AGGGTGAGCG TTTTGATGGC CATGATTTTG CTGCAACAGC CATTGAGAAC GGCGCCGCGG CGTTAATGGT CGAGCGCGAG TTAGCCTTTG ATATTCCGCA GCTGATTGTG CCCGATTGCC AAAAAGCCAT GGGCGCGATA GGGGTTTATG TCCGTGACCA AATCAATCCC ATTTGCGTGG CGTTAACTGG CTCAAACGGC AAGACCAGCG TGAAGGAAAT GATCGCGACC ATTCTGTCGG CAAAGCATCA AATCCTCTAT ACCGCTGGTA ACTTCAACAA TGAAATCGGT GTGCCGCTTA CCTTGCTGCG TTTAACGCCA GCGGATGAGT TTGGGATATT CGAACTCGGC GCAAACCATA AAGGTGAAAT TGATTACACC TCGGGACTCG TGCGTCCGAA CGTGGCGCTG GTGAATAACG TCGGCAGTGC CCACTTAGAA GGATTTGGAT CGCAAGCGGG TGTCGCGCAG GCTAAGTCGG AAATTTTTAA TCATCTGCAG GCCGATGGCA CCGCCATCAT CAACGCCGAT GATGCCTTCG CCGATTTTAT GAGCGTTAAG GCAAGACCTT ATAAGCAACT GAGCTTCTCC CAGCAAGATG GCGCCGCTAA ACGTCATATC GACGTCATCG CTACAGGTCA TAAGACCAAT GCCGATGGTT GCTATCGTTT TATGCTCAAT TACTCAGGTG AATCTTGCCA AGTGGTACTA CCGCTGGCGG GTCGCCATCA GGTGAGTAAT GCACTAGCCG CTGCAAGTGT TTGTATTGCC TTGGGATTAA GTTTGACAGA GATCGCCGAA GGCTTAAGCC AATTAACGCC AGTTAAAGGG CGCATGCAGC CGAGTCAATT GGGACGCGTT CGTCTAATCG ACGATAGCTA TAACGCGAAT CCTGTGTCCG TTGGGGCGGC AATCGCTTGG TTAAAGGAAA TTTCTGAAAA TCGCTGTCTG GTACTGGGAG ATTTAGGAGA ATTAGGCGAC AATGCGCCCC TTTTACACGC TGAACTAGGG CAACTGGCCA AGCAACAGGG GATAGATGCC TTGTTTTGCA CCGGAACGTT AAGTCAGCAC ACGAGCCAAG CTTTCGGTGC GGAGCACTAT GACAGTGTGG CGACGTTAGT AGAAAAACTC ATAAAGCATA TTAACCAGTT ACCGGGACAG GTAACGGTTC TCGTTAAAGG TTCACGTAGC GCCGCCATGG AGCGGGTCGT GGATGGACTA ACAGTAGCCT TCGGGCGTGG GGAGTTAGTG TAA
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Protein sequence | MIPLSLETLS QHLGTFRVGD DVTIEDLSSD SRKIGAATLF VALKGERFDG HDFAATAIEN GAAALMVERE LAFDIPQLIV PDCQKAMGAI GVYVRDQINP ICVALTGSNG KTSVKEMIAT ILSAKHQILY TAGNFNNEIG VPLTLLRLTP ADEFGIFELG ANHKGEIDYT SGLVRPNVAL VNNVGSAHLE GFGSQAGVAQ AKSEIFNHLQ ADGTAIINAD DAFADFMSVK ARPYKQLSFS QQDGAAKRHI DVIATGHKTN ADGCYRFMLN YSGESCQVVL PLAGRHQVSN ALAAASVCIA LGLSLTEIAE GLSQLTPVKG RMQPSQLGRV RLIDDSYNAN PVSVGAAIAW LKEISENRCL VLGDLGELGD NAPLLHAELG QLAKQQGIDA LFCTGTLSQH TSQAFGAEHY DSVATLVEKL IKHINQLPGQ VTVLVKGSRS AAMERVVDGL TVAFGRGELV
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